Cyanobacterium sp. DS4: Dongsha4_07645
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Entry
Dongsha4_07645 CDS
T11028
Symbol
crtH
Name
(GenBank) carotene isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
cyd Cyanobacterium sp. DS4
Pathway
cyd00906
Carotenoid biosynthesis
cyd01100
Metabolic pathways
cyd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Dongsha4_07645 (crtH)
Enzymes [BR:
cyd01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
Dongsha4_07645 (crtH)
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
HI0933_like
GIDA
Pyr_redox_2
Thi4
FAD_oxidored
FAD_binding_3
GDI
Pyr_redox
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
WVL02051
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Position
complement(1767658..1769148)
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AA seq
496 aa
AA seq
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MNQYDVIVIGSGIGGLVTATQLAAKGVKVLVLERYLIPGGSAGYFESQGYRFDVGASMIF
GFGTEGTTNLLTRALDAVNVKMETIPDPVQIHYHLPNNLDLKVHRDYDLFLEELYHYFPE
EKEGIRKFYDECWTVFNALNSMELLSLEEIRYLTRVFFQKPLACLSLVKYLPLNVGDVAR
KYIKNPDLLKFIDMECYCWSVVPADLTPMINAGMVFSDRHYGGINYPKGGVGKIGETLAE
GLEKLGGEIKYQARVTEIIVENHQAIGVRLANGKEYYAQRIVSNATRWDTFEKLIDNKKP
RKEVKWQENYRQSPSFLSLHLGVEAKVLENNPECHHIILEDWNNLEAEQGTIFVSIPTLL
DRSLAPSGYHIIHTFTPSSMDYWQGLTPKQYEFKKEEAAGRLIERLEKIFPGLDAGLDYM
EIGTPRTHRRFLGRINGTYGPIPARRLLGLLSMPFNRTAIKNLYCVGDSTFPGQGLNAVA
FSGFSCAHRIAVDLGY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtatgacgtaattgtaattggttcgggtataggtggcttagtaacagccact
cagttagccgcaaaaggagtaaaagttctggtgttagagcgttatctcattcctggaggt
agtgctgggtatttcgagagtcagggttatcgctttgatgttggtgcttcaatgatattt
ggttttggcactgaaggcacaacgaatttgttaactcgtgctttggatgctgtcaatgtg
aaaatggagactatccctgatccagttcaaatacactatcatttacctaataatctcgac
ttgaaagtacatcgagactatgatttattcttagaggaattgtatcattattttcctgaa
gaaaaagaaggaattagaaagttttatgatgagtgttggactgtttttaatgctcttaac
tccatggaattgctttctttagaggaaattcgctacttaactcgtgttttcttccaaaaa
cctcttgcctgtttaagtttagttaaatatttacccttaaatgtcggtgatgttgctcgt
aagtatatcaaaaatcctgacttattaaaatttattgatatggagtgttattgttggtct
gttgtacctgctgatttaactccgatgataaatgcgggaatggtgttttctgatcgtcat
tatggtggaatcaattatcctaaaggtggggtgggcaaaatcggggaaactttagcggaa
ggtttagaaaagctaggaggagaaattaaatatcaggcaagagttacagaaatcattgtg
gaaaaccatcaagccattggagtaagattggcgaatggaaaagaatattatgctcaaaga
attgtatcgaatgcaactcgttgggatacttttgagaagttaatagataataaaaaacca
agaaaagaggttaagtggcaagagaattatcgtcaatcccccagttttttgagtttacac
ttgggagttgaagctaaagtgttagagaataatcctgaatgtcatcatattattttagag
gattggaacaacttagaagctgaacagggaactatttttgtttctattccaaccctcctc
gatcgcagtttagcaccatcgggctaccatattattcatacttttacccctagttcgatg
gattattggcaaggattaactccgaaacaatatgaattcaagaaagaggaagcggcaggg
cgtttaattgaacgtttagaaaagattttccccggtttggatgcagggttagactatatg
gaaattggcactcctcgcactcatcgacgctttttaggaagaattaacggcacttatgga
cctattcctgctcgtcgtcttttaggtttattatcaatgccatttaatcgtactgctatt
aaaaatttatattgcgtgggagatagtacatttccggggcagggtttaaatgcggttgcg
ttttctggtttcagttgcgctcatcgtattgccgtagatttgggatattag
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