Cyanobacterium sp. DS4: Dongsha4_09485
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Entry
Dongsha4_09485 CDS
T11028
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cyd Cyanobacterium sp. DS4
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyd03016
]
Dongsha4_09485 (truB)
Enzymes [BR:
cyd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dongsha4_09485 (truB)
Transfer RNA biogenesis [BR:
cyd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dongsha4_09485 (truB)
Prokaryotic type
Dongsha4_09485 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pua-like
RE_HaeIII
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WVK98937
LinkDB
All DBs
Position
2181823..2182713
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AA seq
296 aa
AA seq
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MNGFLNLNKPQNFTSHDCVAKLRKILKTKKIGHGGTLDPLATGVLPIAVGKATRLLQFLP
SEKAYKAKVKFGIQTTTDDLEGEIIRQQEVKDLTLAKIMDILPEFMGEIEQIPPAYSAIK
KDGKKLYNLARKGEVIDIPKRKVFIDKIDVLNWQESEYPELDLKVICGGGTYIRAIARDL
GEKLGTGATLANLQRTLSCGMTLENSLSFDDIINQQKADELSLIELDYPLQNMPKIYLNK
EESKSWLLGQKISRITKEEYQFYCTYNHENKFIGISEQRENTETNIKPKIVIYPNL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaatggttttcttaacctcaataagcctcaaaattttacctctcacgattgtgttgct
aaattaagaaaaattctcaagacaaaaaaaattggtcatggtggtactttagatccctta
gctacaggggttttacctatcgctgttggtaaggctactcgtttattacagtttctacct
tcagaaaaagcctataaagccaaagtaaaattcggtattcaaacaactacggatgatttg
gaaggggaaataattagacaacaagaggttaaagatttaactctggcgaaaattatggat
atactgcctgaatttatgggagaaattgagcaaattcctcctgcttatagtgcaattaaa
aaagatggtaaaaaattatataatttagcaagaaaaggggaagttatcgatataccgaaa
agaaaagtttttattgataaaatagacgttttaaactggcaagaaagtgagtatccagaa
ttagatttaaaggttatttgtggtggtggcacttacataagagcgatcgcacgagattta
ggagaaaaattaggaacaggggcaactttagctaatttacaaagaactttaagttgtgga
atgacactggaaaatagtttgagttttgatgatataatcaatcaacaaaaagcagatgaa
ttatcattaattgaattggactatcctctgcaaaatatgcctaaaatatacttaaataaa
gaagaaagtaaaagttggttattaggacaaaaaattagtagaataacaaaagaagaatat
caattttattgtacttataatcacgaaaataaatttatcggtattagcgaacaaagagag
aatacagaaacaaatataaaaccaaaaatagttatttatccaaatttgtaa
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