Cyanobacterium sp. DS4: Dongsha4_09880
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Entry
Dongsha4_09880 CDS
T11028
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
cyd Cyanobacterium sp. DS4
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyd03021
]
Dongsha4_09880
Transcription machinery [BR:
cyd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dongsha4_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_3
HTH_Crp_2
HTH_23
HTH_17
Sigma70_ECF
HTH_24
HTH_11
HTH_8
LacI
HTH_28
HTH_Tnp_ISL3
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
WVK99013
LinkDB
All DBs
Position
2267221..2267997
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AA seq
258 aa
AA seq
DB search
MTTLKTHSEYKQENEKLFVNYRQNHDLKIRNQILELNMGLVRKEVCHWLNQCQENYDDLL
QVGCIGLIRAIDRYDIEKGFAFSSFAVPYVRGEIQHYLRDKGYSIRIPRRCLELKNQSNR
IVRKLRNELNRQPTDQEIARELGVSLQEWHDVKLAHQNREPISLDINANDEDERSTLGDC
LPDHQYRSFQLAQEDKIRLQNALYQLEDGTRKVLEFVFLQDLTQKETADILGVSVITVSR
RIKKGIVKMRNLIKLDEF
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgactactttaaaaacacactctgaatataaacaagaaaacgagaaactttttgtaaat
tatcgacaaaatcatgatttgaagataagaaaccaaattttagagttaaatatgggattg
gtgcgcaaagaagtgtgtcattggttgaatcagtgtcaggagaattatgatgatttatta
caggtaggttgtattggtttaatcagagcaattgatcgctacgatatagaaaaaggtttt
gcatttagttcttttgctgttccttatgtcagaggagaaatacaacattatttaagagat
aaaggctattctattcggattcctcgtcgttgcttagaattaaagaatcagtctaaccgc
attgtgagaaaactcagaaatgaattaaatagacagcctacagatcaagaaattgcaagg
gaattaggagtttctttacaggaatggcatgatgttaaactagcccatcaaaatcgtgaa
ccgattagcttagatattaatgccaatgatgaagatgagcgtagcactttaggagactgt
ttacctgatcatcaatatcgtagttttcaattagcacaggaagacaaaattcgtttacaa
aatgctctatatcaattagaagatggcactcgtaaggttttagaatttgtatttttacaa
gatttaacccaaaaagaaactgctgatattttaggggtgagtgtaattactgtatccaga
agaattaaaaagggtattgtgaaaatgagaaatttaattaaactcgatgaattctaa
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