Cyanobacterium sp. DS4: Dongsha4_11525
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Entry
Dongsha4_11525 CDS
T11028
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
cyd Cyanobacterium sp. DS4
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cyd03009
]
Dongsha4_11525
Enzymes [BR:
cyd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
Dongsha4_11525
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
Dongsha4_11525
Ribosome biogenesis [BR:
cyd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Dongsha4_11525
23S rRNA modification factors
Dongsha4_11525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
LANC_like
Motif
Other DBs
NCBI-ProteinID:
WVK99314
LinkDB
All DBs
Position
complement(2650220..2651038)
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AA seq
272 aa
AA seq
DB search
MPKNKERIDILLTEKQLCDTRTTAQKLIRAGKVKVKGQIVDKPGTLIPLDSIIDVESEPP
FVSRGGEKLIKAIASFNIEVKERICLDGGISTGGFTDCLLQQGAKKVYGIDVGYGQVAWK
IRQDKRLTLLERTNFRHLTPEKLYQGETPADLGVMDLSFISLTKVLAKLWELLITPRDVI
LLVKPQFEVGKEKVGKNGVVRDYRLQAEAIDQVLRHALEIGWQYQNLTYSPITGPAGNIE
YLLWLSENINTLNPTLEQIEQLTKSSQKEIKN
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
ttgccaaaaaacaaagaaagaatagatattctgttaacagaaaaacaattatgtgataca
aggacaactgcccagaaactaattagagcaggtaaagtaaaagtcaaggggcaaatagta
gataaaccaggtactttgataccgttagatagtattatagatgtagaatcagaacctccc
ttcgtttccagagggggagaaaaactgataaaagcgatcgcatcttttaatatagaagta
aaagagagaatctgcctagatggaggaatttccacagggggatttaccgattgcttatta
caacaaggggcaaaaaaagtttatggtatagatgtgggttatggacaagtagcatggaaa
ataagacaggataaaagacttaccctcctagaaagaactaattttcgtcatctaactcca
gaaaaactctatcaaggagaaacaccagccgatttaggagtaatggatttgtcttttatt
tctttaactaaagttttagcaaaattatgggaattactaataactcccagagatgttatt
ttgttagtaaaacctcaatttgaagtaggcaaagaaaaagtaggcaagaatggagttgtg
agagactatcgtttacaagccgaagcgatagatcaagttttacgccatgccctagaaata
ggatggcaatatcaaaatttaacttattctcctattactggtccggccggtaatatagaa
tatttgctatggctttcggaaaatattaatacccttaatcccactttagaacaaatagaa
caattaacgaaatctagtcaaaaagaaattaaaaattaa
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