Cyanobacterium sp. DS4: Dongsha4_12535
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Entry
Dongsha4_12535 CDS
T11028
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cyd Cyanobacterium sp. DS4
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyd03400
]
Dongsha4_12535
DNA repair and recombination proteins [BR:
cyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dongsha4_12535
Archaeal homologous recombinant proteins
Dongsha4_12535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
SbcC_Walker_B
AAA_15
AAA_29
YwqH-like
Prefoldin_2
ABC_tran
Nuf2_DHR10-like
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WVK99504
LinkDB
All DBs
Position
2908069..2911092
Genome browser
AA seq
1007 aa
AA seq
DB search
MIPRKLILKNFLSYRHAELDFAGLHTACICGSNGAGKSSLLEAITWVVWGKTRTASDDDL
IHLGERETRVDFEFIYDEQHYRIIRTRQRKNGSTLDFQVINEQGYKSIGGKGLRDTENKI
KECLKIDYDTFTNSAYLRQGRADEFMLRSPAERRKILADLLKLDQYENLANEAKELARDF
KIQAEEISRNLEENREKLEEKQSFHIAIDETEKELAYFQKKQTTNQEELQKIQLLNNQRS
SLKERCDWQRNQVQTTAQNIQRLQKEKADLEEEINKITVILAQEEDINRNYEQWQKLREK
DEALNTKFNQYQQLLEEKQTLEQSLQKESNDLILAIQREKTKLENLINQERELEAIVNKT
SNLEADLEKLNICRQKLSQLDEIQVQANTLLQQKQSLETEINREEAMLLARLKQLENEEN
NIQTKLNQVPQIRQEFFTLEAKLKEIENTRNYQKRVQEKGEQRNLLIQRYLDNQSNLENQ
IKKLNEKLETLNQDHAVCPLCERELDDTHLEYVINKTQNEQQQIVSQSSYYEIEIINCKR
ELENLRKEYAQLNQELALEDSLKQDYAKLENQLDSIDDTYNQYELILEEKADLQNKLDTG
NYAQDNQSKLREIIEQINNLNYSQENHALLRKEEANLRRVEFQQSRIKDAQNQLKKLAQQ
KPDLQTNIKSLENSLESLRENSPLQLQLRQIEEDIKSLNYDRTYHQNIREQGQQLQPYQL
LYGDLQQAKKQYPQLSTRQTQIETNLTQYNQQKETGEKELNSLQEQLSSLTDYSQELAKL
EQEANNCQENINRLLTAKGRLEQSLTNLKDRENDVKELENRLQKIQKKYRIYQELTIAFG
RKGIQSLMIENILPQLQDEANHILNSLTGSQLSVQFLTQKPKASRSKKSSSQYIDTLEII
ISDAQGTRSYETYSGGEAFRINFAIRLALSRILAQRAGTRLQLLIVDEGFGTQDTDGCNR
LIGALNAIASEFACILTVTHVNQFKEAFQTRIEVYKTQEGSKIKLSS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgatccctcgtaaattaattctcaaaaatttcttaagctatcgtcatgcagaattagac
tttgctggtttacataccgcctgtatttgtggttctaatggtgcaggaaaatcatcttta
ttagaagctataacttgggtagtttggggcaaaactcgcaccgcttccgatgatgattta
atccatttaggggaaagagaaacaagggttgattttgaatttatttatgatgaacaacat
tatcgtattattcgcaccagacagagaaagaatggaagcactttagattttcaagttatt
aatgagcaagggtataaatccattggtggaaaaggattaagagatacagaaaataagatt
aaagaatgcttaaaaattgactatgatacttttactaattctgcttatttaaggcagggt
agagcagatgaatttatgttaagaagtcccgccgaaagaagaaaaatactggcagactta
ttaaagttagatcaatatgaaaatttagctaatgaagcgaaagaattagcgagagatttt
aaaattcaggctgaagaaattagtcgcaatttagaagaaaatagagaaaaattagaagag
aagcaatcatttcatatagctattgatgaaacagaaaaagaattagcatatttccaaaaa
aaacagactactaatcaagaagaattacagaaaattcagcttctaaataatcagagaagt
agcttaaaagaaagatgtgattggcaacgaaatcaagttcaaaccactgctcaaaatatt
caacggttacaaaaggaaaaagcagatttagaagaagaaattaacaaaattaccgttatt
ttagctcaagaagaggatattaatagaaattatgaacaatggcaaaaattaagggaaaaa
gatgaggctttaaatactaagtttaatcaatatcaacaattattagaagaaaaacaaact
ttagaacaatctttgcaaaaagaaagtaatgatttaattttagcgattcaaagggaaaag
acaaagttagaaaatttaattaatcaagaaagagaattagaggcaatagttaacaaaaca
tctaacttagaggcagatttagagaaacttaatatctgtcgtcaaaaactaagtcaatta
gatgaaattcaggtacaagctaatactttattgcaacaaaaacagtcattagaaacagaa
ataaatagagaagaagcgatgttattagctagattaaaacagttagaaaatgaagagaat
aatatacaaactaaattgaatcaagttcctcaaatacgacaagaattttttaccttagaa
gcaaagttaaaagaaatagaaaataccagaaattatcaaaaaagagtacaggaaaaagga
gaacaaagaaatcttttaattcaaagatatttagataatcaaagcaacttagaaaatcaa
attaaaaaactcaatgaaaagttagaaactttaaatcaagatcatgcggtttgcccttta
tgtgagagagaattagatgatactcatttagaatatgtgattaataaaactcaaaatgaa
caacaacaaatagtttcccaatcatcttattatgaaatagagattatcaattgtaaacga
gaattagaaaatttaagaaaagaatacgctcaattaaatcaagaactagctttagaagat
agtcttaaacaagattatgctaaacttgaaaatcaattagattctattgatgatacttat
aatcaatatgaattaatattagaagaaaaagcagatttacaaaacaaattagatacaggt
aattatgctcaagataatcaaagcaaattaagagaaattatcgagcaaattaataactta
aactatagtcaagaaaaccatgctttattaagaaaagaagaggcaaatttacgtcgggta
gaatttcagcaaagtagaataaaagatgctcaaaatcaattaaaaaaattagctcaacaa
aagccagatttacaaacaaatataaaatctttagaaaacagtttagaaagtctcagagaa
aattcccctttacaattacaattacgccaaattgaggaagacataaaatctttaaattac
gatcgcacctatcatcaaaatattagagaacaagggcaacaattgcaaccctatcagcta
ctttatggagatttacaacaggctaaaaaacagtatccccagttaagcacaagacaaact
caaattgagactaatttaacccaatataaccaacaaaaagagacaggagaaaaagaatta
aatagtcttcaagaacaattatcatcattaactgattatagtcaggagttagcgaaacta
gaacaagaagcaaataattgtcaggaaaatatcaatagattactaacagccaaaggaaga
ttagaacaatctttaactaatttaaaagatagagaaaatgatgttaaagaattagaaaat
cgtttacaaaaaatccagaaaaaatatcgtatttatcaggaattaactattgcttttggc
agaaaaggtattcagtctttaatgattgaaaatattttaccccaattacaagacgaggca
aatcatattttaaatagtcttacgggtagtcaattaagtgtacaatttctcacccaaaaa
ccaaaagctagtcgcagtaaaaaatcatcatctcagtatatagatactttagagattatc
atttctgatgctcaaggaacgaggtcttatgagacttattcggggggggaagccttccgt
atcaattttgccattcgtcttgctttatcccgtattctcgcccaaagagcaggtactcgt
ttacaattattaattgtcgatgaaggatttggtactcaagatacagatggttgtaatcgt
ctcattggagctttaaatgcgatcgcatctgaatttgcgtgtattttaacagtaactcac
gttaatcaatttaaagaagccttccaaaccagaattgaggtatataaaactcaggaaggt
tcaaaaataaaactttctagttaa
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