Cyanobacterium sp. DS4: Dongsha4_13330
Help
Entry
Dongsha4_13330 CDS
T11028
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cyd Cyanobacterium sp. DS4
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyd03016
]
Dongsha4_13330 (miaB)
Enzymes [BR:
cyd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Dongsha4_13330 (miaB)
Transfer RNA biogenesis [BR:
cyd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Dongsha4_13330 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Fer4_12
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WVK99654
LinkDB
All DBs
Position
complement(3109480..3110835)
Genome browser
AA seq
451 aa
AA seq
DB search
MNQEKRLYNITTFGCQMNKADSERMAGILENMGFEFTEDPHQAKVVVYNTCTIRDNAEQK
VYSYLGRQAKRKHQEPDLTLVVAGCVAQQEGEQLLRRVPELDLVMGPQHANRLDSLLEQV
FAGNQIVATEPIHIYEDITKPRRESEVSAWVNIIYGCNERCSYCVVPNVRGVEQSRTPEA
IKAEIEELAKQGYKEITLLGQNIDAYGRDLPGVTETGRHKHTLTDLLYYIHDIEGIERIR
FATSHPRYFTERLIKACYELPKVCEHFHIPFQSGDNEILKAMKRGYTHERYRDIIAKIRE
YMPDAAISADAIVGFPGETEEQFQNTLKLVEDIGFDQLNTAAYSPRPNTPAAEWENQIDE
QEKSDRLQRLNHLVAIKAGERSLRYQDRIEEVLVEDINPKDTTQVMGRTRGNRLTFFAGN
LAELKGKVVSVKITEVRAFSLTGNALSLATV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaaaaacgtctatacaatattacaacctttggttgtcagatgaacaaagct
gattcagaaagaatggcaggaatactggagaatatgggttttgagtttacagaagatccc
catcaagcaaaagttgtagtttataatacttgcaccattagagataatgcggaacaaaaa
gtatattcttatttaggcagacaggcaaagagaaaacatcaagaacctgatttaacttta
gttgtggctggatgtgtggcacaacaggaaggagagcagttattaagacgtgtacctgaa
ctagatttagttatgggacctcaacacgctaatcgtttagacagtctcttagaacaagtg
tttgcaggaaaccaaattgttgccaccgaacccatacatatttatgaggatattactaaa
ccccgtcgagaaagtgaagtttctgcgtgggtaaatattatttatggttgtaatgaaaga
tgtagttactgtgtcgttcctaatgttaggggtgtagagcaatcgagaactcctgaagct
atcaaagcggagattgaggagttagccaagcaaggttataaggaaattactcttttaggt
caaaatattgatgcttatgggcgtgatttacccggagtaacggaaacgggcagacataaa
cacactttgacagatttactttactatattcatgacatagaaggtatagagcgtattcgt
tttgcaacttctcatcctcgttattttacggaacgtttaattaaggcttgttatgaattg
cctaaagtctgtgagcatttccatattccttttcaatcgggagataacgaaattcttaag
gcgatgaaacgaggttatacccatgaacgttatcgggatattatcgccaaaattcgggaa
tatatgcctgatgcggcaattagtgcagatgcgatcgttggtttcccgggtgaaacagag
gaacaattccaaaatactttaaaattggtggaagatattggttttgatcaacttaacact
gcggcttattctccacgccctaatactcctgcggcggaatgggaaaatcagattgatgaa
caagaaaaaagcgatcgcctccaaagattaaatcatttagtagccattaaagcaggggaa
agatccttgagataccaagatcgcattgaagaagtattggtagaggatataaaccctaaa
gataccactcaagtgatgggtagaactagaggtaatcgtttgaccttttttgctggaaat
ttagcagaattgaaaggcaaagttgtatcggtgaaaattacagaagttcgagcttttagt
ttaacaggtaatgctttatctttagctactgtttaa
DBGET
integrated database retrieval system
