Cyanobacterium sp. DS4: Dongsha4_13410
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Entry
Dongsha4_13410 CDS
T11028
Symbol
kaiC
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
cyd Cyanobacterium sp. DS4
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
Dongsha4_13410 (kaiC)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
PAXNEB
RecA
DnaB_C
MEDS
GvpD_P-loop
AAA_16
AAA_7
Rad51
AAA_14
ResIII
TrwB_AAD_bind
SLFN-g3_helicase
T2SSE
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WVK99668
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Position
3126745..3128265
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AA seq
506 aa
AA seq
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MSQGAELETDYIEKLETGIPGFDFLAEGGLPKGRATLISGTAGSAKTVFACQFLVEGIKK
GENGVFITFEESPKAIRKNMRGFGWNIKEWEENRQWAFVDASPQPGETPMVSGKYDLGAL
IARIEYAIRKYSAQRVSLDSLGAIFSHLADSAQVRSDLFRLASALRELEVTAIMTAERTE
EYGEISRFGVEEFVADNVVILRNVLNDEKRRRTIEILKYRGTDHQKGEYPFTIIKGKGAV
IIPLSAIELEQHSSNIRITSGSKELDKMCGGGFFRDSIILVSGATGTGKTLMVTEFMAGG
VENNERCLVFAFEESREQLFRNATGWGVDFEKMEKEGKLKVVCRYPETTGLENHLINMKD
TIQTFKPNRVAVDSLSALERVSTLKGFREFIIGLTSFIKQQEIGGLFTSTTPTLLGGSSI
TEAHISTITDSIILLRYVEMYGEMRRGITVLKMRGSMHDKDIREFTIDNRGMHIGHPFRN
VTGILAGTPMYTTQSEVERLTNLFDE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaggtgcagaattagagactgactacatagaaaaactagaaacaggaatcccc
ggatttgacttcttagctgaaggtggactgccaaaaggcagggcgactctcatttcaggt
acggcaggaagtgcaaaaacggtctttgcttgtcaatttttagtcgagggcataaaaaaa
ggagaaaacggagtatttatcacctttgaagaatcacccaaagcaattagaaaaaatatg
cggggatttggttggaatatcaaagagtgggaagaaaatagacaatgggcattcgttgac
gcttctcctcaacccggtgaaacacctatggtaagcggaaaatatgatttgggtgcttta
attgctcgtatagaatacgctattcgcaaatattctgcccaaagagtttctcttgattct
ttaggagctatttttagtcatcttgccgatagcgcccaagtgagaagtgatttattccgt
ttagcatccgcactcagagagttagaagtaaccgctattatgacggctgaacgtacagaa
gaatatggagaaattagtcgttttggcgtagaggaattcgttgccgataatgtggtgatt
ttacgcaatgtgttgaatgatgaaaaacgtcgtcgtacgatcgaaattcttaaatataga
ggtacagatcaccaaaaaggcgaatatccttttaccatcattaaaggtaaaggagcggta
atcatacccttatccgcgatcgaacttgagcaacattcttctaacatacgcattacatcg
ggtagtaaagaactagataaaatgtgcggtggtggatttttccgtgactctattattctc
gtatctggggcaacaggtacaggcaaaaccttaatggtgacggaatttatggcaggtgga
gttgaaaataatgaacgttgtttagtatttgcctttgaagaaagtagagaacaattattc
agaaatgccactggttggggagtggactttgaaaaaatggaaaaagaaggcaaattaaaa
gttgtctgtcgctaccctgaaaccactggtttagaaaaccatctcatcaatatgaaagat
actatccaaacctttaaacctaatcgggttgctgtggatagtctcagtgctttagaaagg
gtatctaccctaaaaggatttagagaatttattattggtttaacctcttttatcaaacaa
caagaaatcggcggtttattcacttctactactcccacacttttaggtggttcatccatt
acagaagcccatatttccactatcactgactctataattcttttgcgctatgtggaaatg
tacggggaaatgcgtcgaggcatcactgttttaaaaatgcgtggctcaatgcacgataaa
gatattagagagtttaccattgataatagaggaatgcacataggtcatcctttccgtaat
gtaacaggtattttagcaggtacgcctatgtacaccactcaatctgaagtagaacgtctt
actaatctatttgacgaataa
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