Cyanobacterium sp. DS4: Dongsha4_13610
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Entry
Dongsha4_13610 CDS
T11028
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
cyd Cyanobacterium sp. DS4
Pathway
cyd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dongsha4_13610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cyd02000
]
Dongsha4_13610
Transporters [BR:
cyd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Dongsha4_13610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
AAA_22
AAA_16
SMC_N
RsgA_GTPase
AAA_29
NB-ARC
AAA_5
PRK
Mg_chelatase
NACHT
NPHP3_N
AAA_33
RNA_helicase
AAA_18
DUF5906
nSTAND1
TsaE
AAA_13
AAA_25
nSTAND3
ATP-synt_ab
MtrB
Motif
Other DBs
NCBI-ProteinID:
WVK99702
LinkDB
All DBs
Position
complement(3173601..3175238)
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AA seq
545 aa
AA seq
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MSQCLLDINNLRIAYSTIHGADDSNPPWAVDGVSFQLNTGEIMALVGESGCGKSTLGRAM
MRLLPNQTRVEGEARFQGESIYDYTASALRRFRGEVVALVFQDPMTRLDPLMTIGDHCIE
TLKAHQPHLSSSQAKEKALTALATVKISPDRFNQYPHEFSGGMRQRVAIALALLLEPKVI
IADEPTTSLDVTIAGEILRELTALCRERDMGLLLISHDLAMVAKYCDRIGVMYGGKMVEM
GTVKDVIYSPKHEYTQSLLKAAFHLHHTGNDNREEKKEENKPLLELKNLQKYYTISVNFI
EQLLGKKSQFIKAVDDLNLNIWQGEILGLVGESGCGKSTLSRTILQLIRATNGQVLWQGK
DLTTLSRSQLRGLRREIQMIFQDPHACLNPMMTIGESIIEPLIIHQLGNKLENRQRVENM
LQRVGLDPKEYYNRYPKELSGGQQQRVAIARALITQPKLVICDEPVSMLDATVQAQVLEL
MLELKQEFKLTYLFITHDLSVARFLCDRIAVMNGGKIVELDVTEKIFNNPQHPYTKTLLA
AAPTL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatgccttttagacattaacaatttacgtattgcctattctactattcatgga
gcagatgatagtaaccccccttgggcagtagatggtgtttcttttcaactgaatacaggg
gaaataatggctttggtgggggaatcgggttgtggtaaatcaactttgggcagagcgatg
atgcgtcttttacctaatcagacaagggtagagggagaggcaaggtttcaaggagagtct
atttatgattatactgcttctgctttacgcagatttcgaggggaagttgttgctttagtt
tttcaagaccctatgacaaggcttgatcctttaatgacgattggagatcattgtatagaa
actctcaaggctcatcaaccccatttatcttcatctcaagcaaaagaaaaagccctcact
gctttggctacggtgaaaatatcccctgatagatttaatcagtatcctcatgagtttagt
ggcggtatgagacaaagagttgcgatcgcacttgcattattattagaacctaaagtaatt
atcgctgatgagcccactaccagtttagatgttactattgcaggagaaattctgcgtgaa
ttaactgcattatgtagagaaagagatatgggattattattgatttcccatgatttagct
atggtagcaaaatattgcgatcgcatcggtgttatgtatggcgggaaaatggtggaaatg
ggaacagtaaaagatgttatatatagccctaaacatgaatatactcagtcattgttaaaa
gccgcttttcatcttcatcacacaggaaatgataatagagaagaaaaaaaagaagaaaat
aagcctttattagaattaaaaaatctgcaaaaatattatactatttccgttaactttatc
gagcaattattaggaaaaaaaagtcagtttattaaagccgttgatgatctcaatttaaac
atttggcaaggggaaatccttggtttagtgggagaatctggttgtgggaaaagtacccta
tcccgcactattttgcaattaattcgggcaaccaatgggcaggtattatggcaaggaaaa
gacctaacaaccctttctaggtcacagttacggggtttaagaagggaaattcaaatgatt
tttcaagacccccacgcctgtttaaatcctatgatgactataggggaatctattattgaa
cctttaatcattcatcaactaggtaataaattagaaaatcgtcaacgggttgaaaatatg
ctacaaagagtaggattagaccccaaagaatattataatcgttacccgaaagaactttca
ggaggtcaacaacaaagagttgccattgcccgtgccttaattacacaaccgaaattagtg
atttgtgatgagcctgtcagtatgttagatgcaacggtacaagcgcaggtattagaattg
atgctagaactaaaacaggaatttaagctaacttatctattcatcacccatgacttatcg
gtagctcgttttctgtgcgatcgcattgccgtcatgaatggtggtaaaatagttgaacta
gatgtcaccgagaaaatatttaacaatcctcagcatccttatacaaaaactctacttgcc
gccgcccctaccctttga
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