Cyanobacterium sp. DS4: Dongsha4_15820
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Entry
Dongsha4_15820 CDS
T11028
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cyd Cyanobacterium sp. DS4
Pathway
cyd00550
Peptidoglycan biosynthesis
cyd01100
Metabolic pathways
cyd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Dongsha4_15820 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Dongsha4_15820 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cyd01011
]
Dongsha4_15820 (mrdA)
Enzymes [BR:
cyd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Dongsha4_15820 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cyd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Dongsha4_15820 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WVL00104
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All DBs
Position
complement(3679414..3681234)
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AA seq
606 aa
AA seq
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MQLTQIIKKSKKSSLKSRKVTFSDTRNQRQKIWLNVGQKDQPIFIMLLISLFFFGAIASR
LAYLQLVEGNTYQEKAENNRTKIIPKPPVRGNLYDRKGRILGATRLSHSAYLWPIVQKQE
NWAEIRSVLAQILNISETELQKTLEQENYDSPTLVRIARNLTPQQITAIEENRNLLSEVE
VDTDTIRYYPHGKNGSHVLGYTREINAEELAERKQQGYRLGDVIGKMGAESAFESDLRGE
WGGILLERDGTGKVLGKLGIKEAKAGNDVTLTLDLDLQKVAEQALGDRKGAVVALDPRDG
GVLAMVSYPGFDPNIFSGKITPQLWKEVQGKGNPFINRSLRGFPPASTFKIVTATAGLES
GKYKPSTILPTYAYLRVGGTAFGEWNRAGFGPMGFVRAMAWSSNTFFGQIGNGVGGETLI
EWARKYGFGSKTGIELEEDTPGLIADNEWKKERFNWEWTVGDTVNMSIGQGFTLATPLQV
AVMFAVPANGGNVVVPHLHRDPSYLERRKSLDLKPETLKTVREGLRAVVTSGTGGKAAVD
GVAVAGKSGTAEAPPGKSHAWFGAFAPYDNPEIVVVAFVEHSGGGGGSTAGPIVQKVLTA
YFAQKK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaacccaaattatcaaaaaatcgaaaaaatcttccttgaaaagtcgcaaagtt
actttctctgatactcgtaatcaacggcaaaaaatttggttgaatgtagggcaaaaggat
caacccatatttatcatgttgcttattagccttttcttttttggcgcgatcgcatctcgg
ttagcatatttacaattagtagaagggaatacatatcaagaaaaagcggaaaacaatcgt
actaaaatcattcctaaacctcccgtcagaggtaatttatatgaccgtaaaggcagaata
ttaggggcaacccgtttatcccactctgcttatttatggcctattgtgcaaaaacaagaa
aattgggcggaaattcgctctgtattagcacaaatcctcaatatttctgaaacagagttg
caaaaaaccctcgaacaagaaaactacgactctcccaccttggttcgtatcgcccgtaat
ctcactcctcaacaaattacagctattgaagaaaaccgtaatttactctcagaagtagaa
gtagataccgataccatcagatattatcctcatggaaaaaatggttctcatgtattagga
tataccagagaaattaatgcagaagaactagccgagagaaaacagcagggttatcgttta
ggagatgtcatcggtaaaatgggagcagagtcagcctttgagtctgatttaaggggagaa
tggggaggaatacttttagaaagagatggaacaggaaaagttttaggtaaattggggata
aaagaagcaaaagcaggaaatgatgttactttaactcttgatttagatttacaaaaagtg
gcagaacaagcattaggcgatcgcaaaggtgcagttgttgcccttgatccccgtgatggc
ggtgttttagctatggttagctatcccggttttgaccccaatattttctctggaaaaatt
actcctcaattatggaaagaagtacaaggaaaaggtaatccttttattaatcgtagttta
cgaggatttcccccagcttctacttttaaaattgtaactgccactgcgggattagaatca
ggcaaatataaacccagtacaattcttcctacctatgcttatttaagagttggcggcaca
gcttttggggaatggaatcgagcaggatttggccccatgggttttgttcgagcaatggct
tggagtagtaatacttttttcggacaaattggtaacggagtgggaggggaaaccctaatt
gagtgggcaagaaaatacggctttggcagtaaaacaggtattgaattagaagaagatacc
cccggtttgattgcagataacgaatggaaaaaggaaagatttaattgggagtggactgta
ggcgacaccgttaatatgtctattgggcaaggttttaccctcgcaacacccttacaagtg
gcggttatgtttgctgttcctgctaatgggggcaatgttgtagtacctcatctgcatcga
gatccttcttaccttgaaagacgcaaatccctagatttaaaacctgaaaccttaaaaaca
gtcagagaaggtttaagagccgttgttacgagtggtacagggggtaaagcggcagtagat
ggggtggcagtagctggaaaaagtggtacagccgaagcacctccgggaaaatctcatgct
tggtttggggcatttgcaccttatgataaccctgaaatagttgtggttgcttttgttgag
cattcaggaggcgggggcggttcaacagcaggccccattgtgcagaaagttttaactgct
tattttgctcagaaaaaataa
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