KEGG   Cyanobacterium sp. DS4: Dongsha4_16530
Entry
Dongsha4_16530    CDS       T11028                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
cyd  Cyanobacterium sp. DS4
Brite
KEGG Orthology (KO) [BR:cyd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cyd02048]
    Dongsha4_16530
Enzymes [BR:cyd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Dongsha4_16530
Prokaryotic defense system [BR:cyd02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Dongsha4_16530
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII T1RH-like_C SNF2-rel_dom
Other DBs
NCBI-ProteinID: WVL00238
LinkDB
Position
3814455..3817628
AA seq 1057 aa
MPQQTEYLLSELPTIEHLKLLQWQHLEGDPFVPEITDRESFKEVLLTDRLKKAIKRINLD
ENGQQWLEDSQINTAVTTLARVTGNSLLEINQQVSELLWQGTITEGKDGKNTIIHYIDFK
NPENNDFLAINQFRVDPPWLTGDKGFIVPDIVLFINGIPLVVMECKSPKLNNPLEQAITD
LLKYSNQRHTSTPEGAEKLFYYNLLMIAVSQHQAVVEAVGGSYSDYTPWKDTYPTSEKEI
ANQLEVTGLNNRQKLIAGMLKPSHLLDILHNFTLFTREQTKIVKIIPYYQQYRAVHKAID
RLENNPTRSQHGDTDQRGGIIWHTQGAGKSLTMVYLVKKIRTTPALRRFKIVVITDRTDL
EKQLAESAVLTGEPMQKAKNVRQLEQLLAQSGSGLVFGMIQKFRGDTEEENSNNNQISIS
NNLNPSEDILVFVDEAHRSHTNTLHLNLAQALPNCAKIGFTGTPIVKSAKKTSAQIFGSY
IDQYTIKDSQEDGVTLPILYEGIEARAKVKQGDDLDQIFDLIFQDKSEAEKAAIKQKYAS
KNQVLEATEIIEAKAKDMLEHYISHILPNGFKAQIAVSSRSASIKYYEALNKAQQQLIEE
LEKRATILKEIDISSIETLDERTQFLTLAYQHLDIIRRLEFAPVISGSKNDPDSWQKWTN
ESNQENHIKRFKKSLDQDGLAFLIVKSMLLTGFNAPLEQVLYLDRTIKEHELLQAIARVN
RTHAKKGYGLVVDYYGVDIASALAMYDINDLESAWKDIRDELPKLQDKHQRVINLFKEHN
CDYNNLQETLNLFIDEGEKFRVIFTEYLKDFLNSLDEILPRPEAKPYLRDAKQFGLIRKS
VADLYRDEQLNLVDAKDKVTALIDQYITIQGINPHIPPIDILSPEFDRKVEEYQNPKTQA
AAMEHAARAYISDNYNDDPSYYKKLSEKLKEIVEQLKENWENQVIALQDLVQDIKQGRKE
DNTGLNPVTERPFLSLIEQYSIAELDIQIKATKEIVKLIKDEIRIVHFWRNPIKQRDLRL
SLIEYIDDRDLVPFEQQEKLADELVQLARHKHIYLTN
NT seq 3174 nt   +upstreamnt  +downstreamnt
atgccccaacaaacagaatatttactttcagaattgcccaccattgaacatttaaaacta
cttcaatggcaacacttagagggcgatccttttgttcctgaaataaccgatcgagagagc
tttaaagaggtactcttgacagatagactgaaaaaagccataaaaaggattaatttagac
gaaaatggtcaacaatggttggaagatagtcaaatcaataccgccgttacaaccttagca
agagttacaggtaatagcttattagaaattaatcagcaagtaagcgaattactgtggcag
ggtacaattaccgagggaaaagacggcaaaaacaccattatccattatatagactttaaa
aaccccgaaaataacgactttttagccataaatcaatttcgagtagatcccccttggcta
acaggagataaaggctttattgtgcctgatatagtgctatttattaacgggattccttta
gtggtaatggaatgtaaaagcccaaaacttaacaatccccttgaacaagctattaccgat
ttactaaaatattctaatcaacgtcatactagcaccccagaaggagcagaaaaattattt
tactataacttgttgatgattgcagtctcccaacatcaagcagtagtggaggcagttggt
ggtagctatagcgattataccccttggaaagacacttatcccacctcagaaaaagaaata
gcgaatcaattagaagtaactgggcttaataatcgtcaaaagttaatcgcagggatgtta
aaaccgtctcatttactagacatattacataattttaccctgtttaccagagaacaaact
aaaatagtcaaaattatcccttactatcaacaatatcgagccgtacataaagcaatcgat
cgactagaaaataaccccacccgtagccaacacggtgacacagatcaaagaggagggata
atttggcatacccaaggggcaggaaaaagcctaacaatggtttatttagtcaagaaaatt
agaaccacaccagccctaagaagatttaaaatagtagtaatcaccgatcgcaccgactta
gaaaaacaactagcagaatcggcagtattaacaggtgagccgatgcaaaaagccaaaaac
gtgagacaattagagcaattactagctcaaagcggttcggggttagttttcggcatgatt
cagaaatttagaggagatacagaagaagaaaatagtaacaataatcaaatcagtattagt
aacaatcttaatccttcagaagatattttagtattcgtggatgaagcccatcgctcccat
acaaataccctacatcttaacttggctcaagccttgcccaactgtgctaaaattggcttt
acaggcacacctattgttaaaagtgccaagaagactagcgctcaaatttttggtagttac
attgatcaatacaccattaaagattcccaagaagatggggtgacattaccgattctatat
gaaggtattgaagcaagggcaaaagtaaaacaaggggatgatttagatcagatatttgac
ttaatttttcaagataaaagcgaagctgaaaaagccgccattaaacaaaaatatgctagt
aaaaatcaagttttagaagccacagaaattattgaagctaaagccaaagatatgctagag
cattatattagccatatcttacccaatgggtttaaagctcaaattgctgtcagtagccgt
tctgcttccattaaatattatgaggcactgaataaagcccaacaacaattaatagaggaa
ctagaaaaacgagccactattctcaaagagatagatatatcaagcatcgaaactttagac
gaaagaacccaatttttaacccttgcttaccaacatcttgacatcattagacgtttagag
tttgccccagtgatttcaggtagtaaaaatgatcctgacagttggcaaaaatggacaaat
gaaagtaatcaagagaaccatattaagcgttttaaaaagtcccttgatcaagatggttta
gccttcctgattgttaaaagtatgctcttaacagggtttaatgcacctttagaacaagtt
ttatatttggatcgcaccatcaaagaacatgaattgctacaggcgatcgcccgtgttaat
cgcacccatgcaaaaaaaggttatggtttagtagttgactattatggcgttgatatagct
tcagctttagccatgtacgacatcaatgacttagaatcagcatggaaggatataagagac
gaattaccaaagctacaagataaacaccaacgggtaatcaatttatttaaagagcataat
tgtgactataataatctgcaagaaactttaaatttatttatcgatgaaggggaaaagttt
agagtaatatttactgaatatttaaaggattttctcaatagcttagatgaaattttacct
cgtccagaagccaaaccttacctaagagatgctaaacagttcggcttaattcgtaaatcc
gtagcggacttatatcgagatgaacaattaaatttagtggatgctaaagacaaagtaacc
gctttaatagaccaatatataaccattcaaggtattaatcctcatataccccccattgat
atattatccccagagttcgatcgaaaagtagaagaatatcaaaacccgaaaactcaagca
gccgccatggaacacgccgcccgtgcgtatatcagcgataattataatgatgatcctagt
tactataaaaaactcagtgaaaaactaaaggaaatagtagaacaattaaaagaaaattgg
gaaaatcaagtaatagcgttacaagatttagttcaagatataaaacaaggtagaaaagaa
gacaatacaggtttaaatcctgtcacagaaagaccatttttaagtttaattgaacaatat
tcgatcgcagaattagacatccaaattaaagccacgaaggaaatagtcaaattaattaag
gatgaaataagaatagttcatttttggcgaaatcctattaaacaaagagatttacggcta
agcctgatagaatatattgacgatcgagatttagtaccttttgaacaacaagaaaaatta
gccgatgaattggtgcaattagctcgtcataagcatatctatttaactaactaa

DBGET integrated database retrieval system