Rippkaea orientalis PCC 8802: Cyan8802_0225
Help
Entry
Cyan8802_0225 CDS
T00968
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cyh
Rippkaea orientalis PCC 8802
Pathway
cyh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cyh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cyan8802_0225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyh03021
]
Cyan8802_0225
03400 DNA repair and recombination proteins [BR:
cyh03400
]
Cyan8802_0225
Enzymes [BR:
cyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cyan8802_0225
Transcription machinery [BR:
cyh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cyan8802_0225
DNA repair and recombination proteins [BR:
cyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cyan8802_0225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
KH_PARP14_8
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ACU99193
LinkDB
All DBs
Position
complement(219037..219987)
Genome browser
AA seq
316 aa
AA seq
DB search
MVVAQFQIECIESKTQKNQSQYSKFVLEPLARGQGTTVGNALRRVLLANLQGAAVTAIRI
AGVNHEFATIPGVREDVLEIMLNMKEIVLKSYSDQAQIGRLVATSAGTVTAANFELPSEV
EVVDPTQYVATLTEGSKLEMEFRIETGTGYKGVERGKDDGTSLDFLEIDAVFMPVTKVNY
IVEDIRGEHGEAQDRLILEIWTNGSFNPKEALSEAAEIVVDLFSPLKDLNQLETTTPDYQ
DDENPQSQIPIEELQLSVRAYNCLKRAQINTVADLLDYSQEDLLEIKNFGQKSAEEVIEA
LQKRLGITLPQEKAKS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggtagtggcgcagtttcaaattgagtgtatagaatctaagactcagaaaaatcaaagt
caatatagtaagtttgtcctagaacctctagcgaggggtcagggaaccaccgtcggcaac
gctttacgacgggtgttactggctaacttgcaaggagccgccgtcacagcgatccggatt
gcaggggtaaatcacgaatttgctaccattccaggggtcagagaggatgtcttagaaatc
atgttaaacatgaaagaaatcgtcctaaaaagctatagtgatcaggcgcaaattggccgc
ctggttgccacaagtgcggggacggtcacggcagccaactttgagttaccctcagaagtg
gaagtggttgatccaacccagtatgtggcaacgctgaccgaaggctcgaaattagagatg
gagtttcggatcgaaacaggaaccgggtataaaggggttgagcgaggcaaagatgacggt
acatcccttgactttctagagatcgatgccgtgtttatgccggtgactaaggtcaattac
atcgtcgaggacatcaggggagaacacggggaagcccaagatcggctaattttggaaatt
tggacgaatgggagttttaatcccaaggaagccctatctgaagctgctgagattgtggtg
gatttgtttagtcccctgaaagacctgaaccagctcgaaaccaccacccctgactatcaa
gacgacgagaatccgcaaagtcagattcccatcgaagaattacagctttcggtcagggct
tacaactgtctaaaacgggcacaaattaatacagtggccgatttattagattatagccaa
gaagatctcttggagatcaaaaacttcggtcaaaaatcggctgaagaagtgatcgaagct
ttgcaaaagcggttaggcattaccctaccccaagaaaaagcgaaatcttaa
DBGET
integrated database retrieval system
