Rippkaea orientalis PCC 8802: Cyan8802_0689
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Entry
Cyan8802_0689 CDS
T00968
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
cyh
Rippkaea orientalis PCC 8802
Brite
KEGG Orthology (KO) [BR:
cyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyh03021
]
Cyan8802_0689
Transcription machinery [BR:
cyh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cyan8802_0689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_r4
Sigma70_ECF
HTH_Crp_2
HTH_23
HTH_24
HTH_8
ApoC-I
HTH_10
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ACU99629
LinkDB
All DBs
Position
complement(694387..695154)
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AA seq
255 aa
AA seq
DB search
MKTKYNNAQGMELLITYSRNPSLALRNQLVELHTGLVRQVAHRISNQCTEPYEDLEQIGY
LGLINAIERFNPHQGCAFSSFAIPYIRGEMLHYLRDKGSVMRIPRRWQELYNKGKKVRKQ
LTTSLGRTPKDQELADALQVSLEEWHECELALQNRMLVSLDSTINQNTDSTVSFGETLPD
HRYQAKQSQEEDRLQLQRAMSQLEDKTKEAIECVFIKELPRKEAAKRIGMSPMTVTRHLH
KGIKQLIILLESQVA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactaagtataataacgcacaggggatggaactgttaatcacttattctcgtaat
ccttctcttgccttgcgtaatcaactggttgaacttcatacgggattagttcgccaggtt
gcccatcgcattagcaaccaatgtacagaaccctatgaagatttagaacaaatcggctac
ttaggattgattaatgcgattgaacgttttaatccccatcaaggttgtgcctttagttcc
tttgccattccctatattcgcggagaaatgctgcactatctgcgggataaagggagtgtg
atgcggattcctcgtcgttggcaagaactgtataacaaaggcaaaaaagttcgcaaacag
ttgacgactagcttgggacgaactcccaaggatcaggaattagctgatgctttacaggtt
tctttagaagaatggcatgaatgcgaactggctttacaaaatcggatgttagtcagtctc
gattctactatcaatcaaaacaccgattcgaccgttagttttggcgaaactttgcctgat
catcgctatcaagctaagcaaagtcaagaggaagatcgattacaattacaacgggcgatg
agtcagcttgaagacaaaaccaaagaagccattgaatgtgtctttattaaggaattacct
cgcaaagaagctgctaaacgaattggcatgagtcctatgacagtcactcgtcatttacac
aagggaattaaacaattaattatcttgttagaatcccaagttgcttaa
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