Rippkaea orientalis PCC 8802: Cyan8802_1315
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Entry
Cyan8802_1315 CDS
T00968
Name
(GenBank) DSH domain protein
Organism
cyh
Rippkaea orientalis PCC 8802
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
nSTAND3
ATPase_2
ADAMTSL1
nSTAND_NTPase5
IstB_IS21
AAA_30
AAA_19
DUF3516
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACV00238
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Position
1335087..1337990
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AA seq
967 aa
AA seq
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MNQPLAQSQLNLATLFPFELDGFQKDAIAALARGKSVVICAPTGSGKTVIGEYAIYHALE
QGKRVFYTTPLKALSNQKFRDFQDKFSQTEDNSLVGLITGDTVINANAAIVIMTTEIFRN
MLYETPIGQVGTSLENVATVILDECHYISDRGRGTVWEESIIYCPPNIQLVALSATIGNP
EQLTDWINQVRLTAPGVDPKSDAVSLCELINSDFRPVPLRFFFSTKKGLAPLLNPKQTAL
NPRLKFKGNPNKKRRLKREDCPSLLTVIKQLEKQDLLPAIYVIFSRRGCDQSVQRLEGIT
LVNPEEAHALQYNLLTFFLAENPRLQESLLEAVKTENPPLYQPLLDFLSSPIPDADLFDY
LARDQETKLHLFQLLATTSQLVRSDQLEPLTRGIAVHHAGILPVWKELVEQLFEAGLVKV
VFATATLSAGINMPARTTVISALSKRTDTGHGMLTPSEFLQIAGRAGRRGMDEVGYVVTV
QTPFEGAQEAAFLATAGSEPLKSCFTPSYGMVLNLLQKHTLNEAKHLLERSFAEYLAKLK
IEPEQQAIAALTTELTQLDMALAGLSESELFGYEKLKARLKEEQRLLKLLEEQAEETRKQ
QIFPLLAKLNTGDLLYLKGKHLKVATPQLAVLVGMVPGSGQAPDFLCLGEDNRWYLVKRA
DIVEINSASLPRESLQSLNLPDLEACRLGKGPKGDETSRQVCQQMGDRAVSLKIAPEVMA
QQQRLDEIQRTLEQHPLENRKNPARLLKLHHQRLRLREQLHISQVRFQKLQSSQSYYWEE
FLNLIEILREFEALEGYHPTPLGQACATIRAENELWLGLVMMSGALERLESPQLAAAVSA
LITESLRPDTWTNYLPSPEIIALFTESHPQGVSLQEIRRLLYQTQSRYHITIPVWLELDL
IGMIEQWALGADWQELCENTSLDEGDVVRLLRRTIDLLWQIPQIPGVSDYLKDTAKEAVT
RLKRFPL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaacccttagcccagtctcaattaaatttagctactctgtttccctttgaactc
gatggattccaaaaagacgcgatcgcagccctagccagaggaaaatccgtagtcatctgt
gcccccacggggtcaggaaagaccgtcattggagaatatgccatttatcatgccttagaa
cagggtaagcgtgtcttctataccactcccctcaaagccctttctaatcaaaaattccgc
gactttcaggataaatttagtcaaacagaagataacagcctagtcgggttaatcacaggg
gacacggtaattaatgccaacgctgccattgtgattatgaccacggaaatcttccgaaat
atgctctacgaaacccccattggtcaagtgggaacctccctagaaaacgtagccacggtt
atcttagatgaatgtcattatatcagcgatcgcggtcggggaaccgtttgggaagagtcg
attatttactgtccccccaatattcaattagtcgccctttctgccaccatcggcaacccc
gaacaactcaccgactggattaaccaagttcgcttaactgcccctggagttgacccaaaa
tccgatgctgtgagtctttgtgagttaattaattccgattttcgccccgtcccgcttcgt
ttcttttttagtaccaaaaaaggacttgcccccctactcaatcccaaacaaacagccctt
aaccctcggcttaaatttaaaggaaatcctaacaaaaaacgccgactcaaacgggaagac
tgtccgagtttattaacggtcattaaacaattagaaaaacaagatttattgcccgctatt
tatgtgatttttagccgtcgcggctgcgatcaatcagtacaacgacttgaagggatcacc
ctagtcaacccagaagaagcccatgccctacaatacaatttattaacctttttcttagcg
gaaaatccccggttacaagaaagtctgctggaggctgtaaaaaccgaaaatcctccctta
tatcaaccccttttagactttttatccagtcctatccctgatgctgatttatttgattat
ttagccagagatcaagaaacaaaacttcatttatttcaattattagccaccacttcccaa
ttagtcagaagtgatcaattagaacctctcaccagaggcattgccgtccaccatgcaggg
attcttcccgtttggaaagaattggtcgaacaactctttgaagccggattagtcaaagtc
gtctttgccaccgctaccctatcggccggcattaatatgccagcgcggacgacggttatt
tctgccttgtctaaacgtaccgataccggacacgggatgttaacgccctcggagttccta
caaatcgctggacgcgctggaagacgagggatggatgaagtgggttatgtggtgacagtt
caaaccccctttgaaggagcccaagaagctgctttcttagccacagccgggtcagaaccc
ttaaaaagctgttttaccccttcctacgggatggtgttgaatttattacaaaaacatact
ttaaatgaggcaaaacacttattagagcgcagttttgccgaatatctggcaaaactgaag
atcgaacctgaacaacaagcgatcgcagccttaaccacggaactgacccaactcgatatg
gctttagcaggactctccgaaagcgaactgtttggctatgagaaactaaaagcccgtctt
aaggaggaacagcgattgctgaaactgcttgaagaacaggcagaagaaacgagaaaacag
caaatcttccccctattagccaagctcaacacgggagatcttttgtatttaaagggaaaa
cacctaaaagtcgctacccctcaattagcggttttagtggggatggttccgggttcgggt
caggctcctgattttctgtgtttaggagaagataatcggtggtatttggtcaaaagagcc
gatatcgttgaaataaattcggcttcgttgccgcgtgagagtcttcagtccttaaatttg
cccgatctcgaagcgtgtcgtttgggtaaaggtccaaaaggcgatgaaacgtcaaggcaa
gtttgtcagcaaatgggcgatcgcgctgtttctctaaaaattgcccctgaagtcatggca
caacagcagcgtttagacgaaattcaacgaaccctagagcagcatcccctagaaaaccgc
aaaaatccagcccgattattgaaattacaccatcaacggctgagattgcgcgaacaactc
catattagtcaggttcggtttcaaaagcttcagtcaagtcaatcctattattgggaagaa
tttctcaatttaatcgaaattttacgggaatttgaagctttagagggctatcatcctact
ccccttggccaagcttgtgcaacgattcgcgccgaaaatgaactctggttaggattagta
atgatgtcgggtgctttggaacggttagagtctccccaactcgcggccgcggtgagtgcc
ttaattaccgaaagtctgcggcctgatacttggacaaattatctcccttccccagaaatt
atcgcgttatttacggaaagtcatccccaaggagtgagtttacaagaaattcgccgtctt
ctctatcaaactcaatctcgctatcatatcaccattcccgtttggttagaattggatttg
attggtatgatcgagcaatgggctttaggggcagattggcaggaattatgcgagaatacc
agtctcgatgaaggagatgtcgtgcggttgttaagaagaacaattgatctcctctggcaa
attccccaaatacccggagtttctgattatttaaaagacactgccaaagaggcagtgact
cggttaaaacggtttccgctttaa
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