Rippkaea orientalis PCC 8802: Cyan8802_1686
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Entry
Cyan8802_1686 CDS
T00968
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cyh
Rippkaea orientalis PCC 8802
Brite
KEGG Orthology (KO) [BR:
cyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyh03016
]
Cyan8802_1686
Enzymes [BR:
cyh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Cyan8802_1686
Transfer RNA biogenesis [BR:
cyh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Cyan8802_1686
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
Rnk_N
Motif
Other DBs
NCBI-ProteinID:
ACV00590
LinkDB
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Position
complement(1724590..1726605)
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AA seq
671 aa
AA seq
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MEKGKLIEIRVQGERRLAVVDRPEGKKDWMVIDAGGQSHKIRPQRVEYEVEGGPYSPQEI
PQFLRDVEPYLDPSSLEVAWELLVEDAEGVTPAGLSQLLFSAKTPPQCYAAHSLLSEDKI
YFKKKGDRYEPRPSSQVEEIKHQLDVEQHRQQEKAQFFTKIRQAIAQELVNWTDSDRNRL
ESLERLILQPEQTHRNAQELLSEIGRSQTPEAAFELLVELGWWSRHENLFLRRSSYPMQF
PKKVLDVAQSFLTLPPPDQDEDRLDLTHLKVYTIDDESTEEIDDGLSVEFLSDDQVKLWI
HIADPTRLVSPGDELDLEARRRTTTLYLPTGMISMFPVELATGPMSLIQGKICPSLSFAV
TLDDQGAVLDYSIHASLIKPTYRLTYYDVDEMLQWGIKNEPEIRILAETAKKRHLWRQSQ
GAINIKMPEAVIKVKSEDEIVIELIESSRSRQLVAEMMILAGEVAGRYCQEHGLPVPFRG
QPQPELPPDEELLLLPPGPVRACALRRCMPRSEIGTIPNRHASLGLNTYTQVTSPIRRYT
DLLTHFQLKAHLRGDKLPFSLDMMQQILYGVTLSAQEASLVERQTNRYWGLEFLRRNADE
IWHGIVLRWLREDENLGILLLEELGLELPHRFEKAVSLGDRLNVQVSCADPHRDEIRFRE
MLQHEVHSSAI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaggaaaactcatcgaaattagggtacaaggagaacgtcgcctagccgtcgtt
gatcgtccagaagggaaaaaagattggatggtcatcgatgcggggggtcaatctcacaaa
attcgaccccaacgggtagaatacgaagtcgaggggggtccctatagtcctcaagagatc
ccccaatttctgcgagacgtggaaccctaccttgatccatctagtttagaagtcgcttgg
gaattactggtagaagacgcagaaggagtcacgccagccggactgtcccaattactattt
tcagccaaaaccccccctcaatgctacgccgcccatagcctactgtctgaggataaaatt
tacttcaagaaaaaaggcgatcgctacgaaccccgtcccagtagtcaagtcgaagaaatt
aaacatcaactcgacgttgaacagcatcgtcagcaagaaaaagcgcaattttttactaag
ataagacaagcgatcgcgcaagaacttgttaactggacagacagcgatcgcaaccgtttg
gagtccctcgaacgcttgatcttgcaaccagaacaaacccaccggaatgcccaagaatta
ctcagtgagatcgggcgatcgcaaaccccagaagccgcctttgaactcctagtagaatta
gggtggtggagtcgccacgaaaacctatttctacggcgcagttcctatcctatgcagttt
cccaaaaaggtacttgatgtggcccaatcctttttaacccttcctccccccgatcaagac
gaagatcgcctggatttaacccatcttaaggtctataccatcgatgatgaaagtaccgaa
gaaattgacgacgggttaagcgtcgagtttctaagcgacgatcaggtgaaactatggatt
catattgctgaccccactcggttagtttcaccaggagacgaattagacctagaagccaga
agacggacgaccaccctctatttacccaccgggatgatttccatgtttcccgtggaatta
gccaccggtccaatgagtttaattcaagggaaaatctgtccttccctcagttttgctgtg
accctcgacgatcagggggcagtgttggactattctatccatgccagccttattaaaccc
acctaccgcctcacttactacgatgtggatgaaatgctgcaatggggcattaaaaatgaa
ccagagattaggattttggctgaaactgctaaaaaacgccatctgtggcgacaatcccaa
ggagctattaatattaagatgccagaggcggtgattaaggtcaaatcggaagacgagatc
gttatcgaactgattgagagttcacgatcgcgccaattggtagcagaaatgatgatttta
gcgggagaagtggctggacgatactgtcaagaacatggcttacccgttcccttccggggt
caacctcaacccgaattaccccccgatgaggaattgttgctattaccaccgggtcctgta
cgagcctgtgctttgcgtcgctgtatgccccgcagtgaaattgggacgataccgaaccgt
cacgctagtttagggttaaatacctatacacaagtgacctctccgattcggcgttatacg
gatttattaacccattttcagcttaaagcccatttacggggggataagttgcccttttcc
ctcgatatgatgcagcaaatcctctatggcgttaccttatcagcccaagaagcgtcctta
gtggaacggcaaaccaatcgttattgggggttagaatttttgcggcgcaatgcggatgag
atttggcacggcattgtgttacggtggttgcgagaagatgaaaatttaggaatactatta
ttagaggaattggggttagagttgccccatcgctttgaaaaggcggtttcgttaggcgat
cgcctgaatgttcaagtcagttgtgctgatccccatcgggatgaaattcggtttcgagaa
atgctacaacacgaagttcactcaagtgccatttaa
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