Rippkaea orientalis PCC 8802: Cyan8802_2118
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Entry
Cyan8802_2118 CDS
T00968
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cyh
Rippkaea orientalis PCC 8802
Pathway
cyh03030
DNA replication
cyh03430
Mismatch repair
cyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cyan8802_2118
03430 Mismatch repair
Cyan8802_2118
03440 Homologous recombination
Cyan8802_2118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cyh03032
]
Cyan8802_2118
03400 DNA repair and recombination proteins [BR:
cyh03400
]
Cyan8802_2118
Enzymes [BR:
cyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cyan8802_2118
DNA replication proteins [BR:
cyh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cyan8802_2118
DNA repair and recombination proteins [BR:
cyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cyan8802_2118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
TIP49
AAA_19
AAA_16
DnaA_N-like_STI
Rad17
AAA_18
RCF1-5-like_lid
Herpes_Helicase
AAA_14
DUF815
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ACV01005
LinkDB
All DBs
Position
2124814..2126766
Genome browser
AA seq
650 aa
AA seq
DB search
MSSYEPLHHKYRPQTFADLVGQEAIATTLTNAIAAKRIAPAYLFTGPRGTGKTSSARILA
KSLNCLAFSDPTATPCGKCEVCRAIARGSALDVIEIDAASNTGVDNIREIIERAQFAPVQ
CRYKVYVIDECHMLSVAAFNALLKTLEEPPDRVIFVLATTDPQRVLPTIISRCQRFDYRR
IPLDAMVNHLSKIAQQETIDIAQDALILVAQIANGGLRDAESLLDQLSLLSGTITTDKVW
ELVGAVPEQDLLLLLQAIASNNAELVIDRCRHLMNRGREPLVVLQNLAGFYLNLLIAKTA
PNRPDMVAVTAPTWQALCNEAHQWNLETILQGQQRLKDSEFQLKNTTQPRLWLEVTLLSL
LPSAFMKSEVTSQKSEVIPTPTPPLSPSPPPPSPHPPHTPPPPLTPSPPLSQNPVINDVN
GIWPAILAKLQPFSQGLVNSHCYFLNLEESAAYIGVRSQGLLKLVQGKIPDLEAAFAAVC
QRPIKVHLKVASPSSNAVSTSPQPVNPSPSPVPISNSETEKPVIAQPVINSDKETISNTP
KTEIKAFSHKQNNLPESEINLKDISENLDDEDLKKVAENFAKIFEGEIVDLAPSFNSKIP
SLSVGSEEQKIKHKTQPNSQLSDSIKLDINNSIRVKGRPEIIEDEDDLDF
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctatgaacccctccatcataaatatcgtccccagacattcgcggacttagtg
ggacaagaagcgatcgccactaccctaaccaatgcgatcgccgctaagcgtatcgccccg
gcctacctctttacagggcctaggggaacagggaaaacctctagtgcccgtattttagcc
aagtctctcaactgtctagcgttttctgacccaacggctactccttgtgggaagtgtgag
gtctgtcgggcgatcgctagggggtcagcattggatgtcattgaaattgacgcagccagc
aatacaggggttgataatattcgagaaatcatcgaaagggcgcaatttgccccggtacaa
tgtcgttataaggtatatgtcatcgatgaatgccatatgctcagtgtagcagcctttaac
gccctcctgaaaaccctcgaagaaccgcccgatcgcgttatttttgtcttagcgacgacc
gatccccaacgggtgttaccgaccattatctcgcgctgtcaacgctttgactatcgacgt
attcctctcgatgcgatggtcaatcatttaagtaaaattgctcagcaagaaaccatcgat
attgcccaagatgccttaattttagtcgctcaaatcgctaatggggggttgcgcgatgcg
gaaagtctgttagatcagttgagtctcttgtcagggactattaccacagataaggtttgg
gagttggtgggggcagttcctgaacaagatttattgctattattgcaagcgatcgcttct
aataatgctgaattagtcattgatcgctgtcgtcatctcatgaaccgaggccgggaacct
ttggtggttttgcagaatttagccggattttacctcaatttgttgattgcgaaaactgcc
cccaatcgtcctgacatggtagcagtgaccgctcccacttggcaagcgttatgtaatgaa
gcacaccaatggaacctcgaaaccattctccaaggacaacaacgccttaaagatagtgaa
tttcaactcaaaaatacgactcaaccccgtttatggctagaagtcaccctgttaagttta
ttaccttctgcttttatgaagtcagaagtcacaagtcagaaatcagaagttatcccaacc
cccactccccccctctccccctctccccctcccccatctccccaccctccccacactccc
cctcctcccctgaccccctcaccccctctctctcaaaatcctgtaattaatgatgtcaat
gggatatggccggcaattttagctaaattacagccattctctcaaggtttagtcaattct
cactgctatttcctcaatttagaggagtcagcagcctacattggggttcgcagtcaaggg
ttacttaaattagttcaaggcaaaattcctgatcttgaggctgcttttgccgcagtttgt
caacgtccaattaaggttcatcttaaagtcgcttctccttcatctaacgctgtttctacc
agtccccaacccgttaacccttctccttcccctgttcctatttctaatagcgaaactgaa
aaacctgttattgctcaacctgttatcaattctgacaaagagactatctctaatactcct
aaaactgagattaaagcgttttctcataagcaaaataatttacccgaaagtgagattaat
ctaaaggatattagtgaaaatcttgatgatgaagatcttaaaaaagtagcagaaaatttt
gccaaaatttttgaaggagaaatcgttgatttagccccctcatttaactctaaaatacct
tcattatcagtaggatctgaagaacagaaaattaaacacaaaacacaaccaaattcacaa
ttaagtgattcaattaaattggatattaataatagcattcgggtcaaaggacgaccagaa
atcatagaagatgaggatgatcttgatttttaa
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