Rippkaea orientalis PCC 8802: Cyan8802_3159
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Entry
Cyan8802_3159 CDS
T00968
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
cyh
Rippkaea orientalis PCC 8802
Brite
KEGG Orthology (KO) [BR:
cyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cyh03032
]
Cyan8802_3159
03036 Chromosome and associated proteins [BR:
cyh03036
]
Cyan8802_3159
03400 DNA repair and recombination proteins [BR:
cyh03400
]
Cyan8802_3159
DNA replication proteins [BR:
cyh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Cyan8802_3159
Chromosome and associated proteins [BR:
cyh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Cyan8802_3159
DNA repair and recombination proteins [BR:
cyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Cyan8802_3159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ACV01998
LinkDB
All DBs
Position
3226296..3226583
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AA seq
95 aa
AA seq
DB search
MNKGELIDAVAERAQVPKKQAEAVISATIETIMEAVSSEDKVTLVGFGSFEARDRKAREG
RNPKTNEKMVIPATKVPAFSAGKQFKTKVASKGEE
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggcgaattaattgatgcagtagccgaaagagcccaagttcctaaaaaacag
gcagaagcggttattagtgcgacgattgaaaccattatggaagctgtctcttcagaggat
aaagttaccttagtcggttttggttcttttgaagcccgcgatcgcaaagcccgtgaaggt
cggaacccaaaaaccaacgaaaaaatggtgattccagcgacaaaagttcccgccttttct
gctggaaaacaatttaaaaccaaagttgcctctaaaggagaggaatag
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