Rippkaea orientalis PCC 8802: Cyan8802_3290
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Entry
Cyan8802_3290 CDS
T00968
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cyh
Rippkaea orientalis PCC 8802
Pathway
cyh03420
Nucleotide excision repair
cyh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cyan8802_3290
03430 Mismatch repair
Cyan8802_3290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyh03400
]
Cyan8802_3290
Enzymes [BR:
cyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cyan8802_3290
DNA repair and recombination proteins [BR:
cyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cyan8802_3290
MMR (mismatch excision repair)
Other MMR factors
Cyan8802_3290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
DEAD
Helicase_RecD
SinI
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACV02125
LinkDB
All DBs
Position
complement(3362666..3365017)
Genome browser
AA seq
783 aa
AA seq
DB search
MTISEYFDLAEKLQEIRNSLRPGQQQLADWKGGQMAISAVPGAGKSHSLAVAAALAIARY
QLHPRKQLVIVTYTRSAAAGIKTKIKQRLRELRLPQTGFMVQTLHGLALNIASRHPELSQ
LNLDTSTVVIPTPSHRIIRASVEQWITANPMRYQVLLEGREFDGEETERLRRQSVLRTEV
LPQLAHIIVREAKSSGLSPEQVGELSEYSKDYYQILAIGSGLYKAYEQVMRSQDFIDYDD
MILGALRVLEKDAIRQIWQQQVFAVFEDEAQDSSPLQERLINLLAQDPNLSNNPPNLIRV
GDPNQAINSTFTPADPVYFNWFCETCKSQDKLAIMDQAGRSSKIIIEAANFVLNWVNNQW
KNDNSKKENDNYFLDKSSLNTEKNDTPFRQQDIQLVPTNDPQPNPESVGQGVEIYTPEDI
YQTVELIRKRVVNLLKNNPDHRAAILVRENRQGRFLAEQLAHLPKEEGIKLYEVGEVDRF
SQIPQEILRILEFIDRPHSPESLKAALEILEKRDLIAAQDLNALVTYPENFLYPTPLIEE
PKKPVLQARRYCRNLLRAKLELPSYQLIPFLGMTLKYTGAELATVQKLSDRIEQQIKGKY
SLKTTISTLKEIVNIEGFEGVDEDTEDRYTRPNQVTIITMHKAKGLDWDYVFIPFLHQDV
LPGQPWVPTSAKFLGDFALSEVARAQIRAAVHSQYINQGIISQIREPETAWQEAGQLKKA
EEYRLLYVAMTRAKRLLWMSAAQLGPFRWNTFRGDGTINLQTKIPCPILPVLQEQFPQSI
MDF
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgactatttctgagtattttgatttagcggaaaaattacaagaaattcgtaatagttta
cgccctggacaacagcaactagccgactggaaagggggacaaatggccatttctgcggtt
ccaggggcgggaaaatcccatagtttagccgttgccgcagccctagcgatcgcccgttat
caacttcatcccagaaaacagttagttattgttacctatacccgttctgctgcggcagga
attaaaaccaaaatcaagcaacgtttgcgggaattacgattaccccaaaccggatttatg
gtacaaactttgcacggtttagccctcaatattgccagtcgtcaccctgaattatctcaa
ctgaatttagacacttctacggtagtcattcctacccctagtcatcgcattattcgcgct
tctgttgaacagtggattacggctaacccgatgcgctatcaagtattactagaaggacgg
gaatttgatggagaagaaacggaaagattgcgtcgtcagtcggtattacgaactgaagtt
ttaccccaacttgcccatataattgtccgtgaagctaaaagttctggactgtcccctgaa
caagtgggggaattaagtgaatattcaaaagattattatcaaattttagccattggttcg
gggttatataaagcctatgaacaagtgatgcgatcgcaggattttattgattatgatgac
atgattttaggggctttaagagttttagaaaaggacgctattcgtcagatttggcagcaa
caagtctttgccgtttttgaagatgaagcccaagattctagtcctttacaagaaagatta
attaatcttttagcacaagatcccaatttatctaataatccccctaatttaattagggtt
ggtgatcctaaccaagccattaattctacctttactccggctgatcccgtgtattttaat
tggttctgtgaaacttgcaaatcccaagataaattagccattatggatcaggcgggacgc
agtagtaaaataattattgaagctgctaattttgtcctaaattgggttaataaccaatgg
aaaaatgacaatagcaagaaagaaaatgacaattactttttagataaatctagcttaaat
accgaaaaaaatgacacaccttttcgacaacaagatatccaattagttcctacaaatgac
ccccaacctaaccctgaatccgtcggacaaggagtagaaatctatacaccagaagacatt
tatcaaacagtcgaattaatccgtaaaagagtggttaatttattgaaaaacaaccccgat
catcgcgcagcaattttagtcagagaaaaccgtcaaggtcgctttttagcggaacaatta
gcccatttacccaaagaagaaggcatcaaactgtatgaagtaggagaagtggatcggttt
tcccaaattccccaagaaatcctcagaatattggaatttattgaccgtccccattctcct
gaatccttaaaagcagccttagaaatcttagaaaaacgagacttaattgctgcccaagat
ctcaatgccttagttacttatcccgaaaactttctctatcctactcccttaattgaagaa
cccaaaaagcccgttttacaagcgcgtcgttactgtcgtaatctgttaagagctaaatta
gaattaccctcctatcaattaattccctttttgggcatgacccttaaatatactggtgca
gaattagccacggttcaaaaactttctgacagaattgagcaacaaatcaaagggaaatat
tcccttaaaacaacgatttcaaccctcaaagaaattgttaatatagaaggatttgaagga
gtagacgaagacacagaagatcgctatactcgtcccaatcaagtaactattattaccatg
cacaaagccaaaggattagattgggattatgtctttattcctttccttcatcaagatgtt
ttgcccggtcaaccttgggttcctacatcagctaaatttttaggggattttgccctctca
gaagtcgcccgtgcccaaattcgcgctgcggttcatagtcaatatattaatcaaggaatc
atctctcaaatccgtgaacctgaaaccgcttggcaagaagccggacaactcaaaaaagcg
gaagaatatcgcttactctatgttgcgatgacgcgggcaaaacggttactatggatgtct
gctgcacaattaggtccctttcgttggaatacctttagaggagatggcacgattaattta
caaacaaaaattccttgtcctatcttacccgttttacaagaacaatttcctcaatcaatc
atggatttttaa
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