Rippkaea orientalis PCC 8802: Cyan8802_3682
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Entry
Cyan8802_3682 CDS
T00968
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cyh
Rippkaea orientalis PCC 8802
Pathway
cyh03030
DNA replication
cyh03430
Mismatch repair
cyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cyan8802_3682
03430 Mismatch repair
Cyan8802_3682
03440 Homologous recombination
Cyan8802_3682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cyh03032
]
Cyan8802_3682
03400 DNA repair and recombination proteins [BR:
cyh03400
]
Cyan8802_3682
Enzymes [BR:
cyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cyan8802_3682
DNA replication proteins [BR:
cyh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cyan8802_3682
DNA repair and recombination proteins [BR:
cyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cyan8802_3682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
ACV02494
LinkDB
All DBs
Position
3759442..3762066
Genome browser
AA seq
874 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQLNALVDRAVELEMPAIALTDHGVMYGAIELMKVCRNKGIK
PIIGNEMYVINEDIEVNKRHRKYHQVVLAKNTQGYKNLVKLTTISHLKGIQGKGIFARPC
INKELLTQYHEGLIVTSACLGGEVPQSILAGDTKQAKTVAKWYQKLFKDDYYLEIQDHGS
QEDRIVNRELVKIARDLGIKIIATNDSHFISCYDVEAHDALLCIQTGKLITEDKRLRYSG
TEYLKSAEEMALLFRDHLPDDVIEEAINNTLEVADKIEPYKNIFGEPRIPNYPVPSGHTP
DSYVEEIAWEGLLERLKCRSRGEISDVYKERLEYELKMLQRMGFSTYFLVVWDYIKYARD
NGIPVGPGRGSAAGSLVAYCLKITNIDPVHHGLLFERFLNPERKSMPDVDTDFCIERRDE
MIKYVTEKYGEANVAQIITFNRMTSKAVLKDVARVLDIPYSESDKMAKMIPVSRGKPTKL
KVMISDETPCPEFKERYDNDPQVRRWLDMAIRIEGTNKTFGVHAAGVVISSEPLDEIVPL
QKNNEGSVITQYFMEDLESLGLLKMDFLGLRNLTTIQKTAELIKQNRKVELDLDQLPLEE
RKALQIIAKGTAKKLPEDIQKTHKLLERGDLEGIFQLESSGMKQIVKDLKPSGIEDISSI
LALYRPGPLDAGLIPKFINRKHGQEPIKYEHRLLEPILKETYAVLVYQEQIMKMAQDLAG
YSLGEADLLRRAMGKKKISEMEKHREKFIEGAAKNGVIKEIAENLFTQMVQFAEYCLSYD
TEILTVEYGAIPIGKVVEENIDCTVYTVDKNGFVYTQNIAQWHLRGQQEVFEYYLDDGSI
LRATKDHQFMTLEGEMLPIHEIFERGLELKKIKI
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttggcttacatatccacagtgattatagtttactcgatggagcatctcaa
ttaaatgctttagttgatcgcgcggtagaattagaaatgccagcgatcgctttaacggat
catggggtgatgtatggggcgatcgaattaatgaaggtttgccgtaataaaggaattaaa
cctattattggcaatgaaatgtatgtgattaatgaagatattgaggtcaataaacggcat
cgaaaatatcatcaagttgttttagcaaaaaatacccaaggctataaaaatctagttaaa
ctaacaactatttcccatcttaaagggattcaaggaaaggggatttttgcccgtccttgt
attaataaagaattactgacccaataccatgaaggcttgattgttaccagtgcttgttta
gggggagaagtgccccaatcgattttagcaggggatactaaacaagcgaaaaccgtggca
aaatggtatcaaaaactcttcaaggatgactattatttagaaattcaagatcatggatca
caagaagatcgaattgtcaatagagaattagtaaaaattgcccgtgatttaggcataaaa
attattgcaaccaatgactctcattttatttcctgttatgatgtagaagcccatgatgcc
ctactttgtattcaaaccggtaaactaattactgaagataaacggctcagatatagtggg
actgaatatctcaaatccgccgaagaaatggcgttattatttcgcgatcatctccctgat
gatgttattgaagaagcgattaacaataccctcgaagttgcagataaaattgagccttac
aagaacatttttggagagcctcgcattcctaattatcccgttccttcgggacatactccc
gatagttatgttgaagaaattgcttgggaagggttgcttgaaaggctaaaatgtcgctcc
cgtggggaaatttcagacgtttataaagaacggctagaatatgaattaaaaatgctccaa
aggatgggcttttctacttattttttagtcgtttgggattatattaaatatgcgagggat
aatggtattcccgtaggacccggacgcggttctgctgcgggttctttagttgcctattgt
ttaaaaataaccaatattgatcccgtgcatcacggacttttatttgaaagatttttgaat
cctgaacgtaaatctatgcctgatgttgatacagatttttgtattgaaagacgggatgaa
atgattaagtatgtcacagaaaaatacggagaagcgaatgtcgctcaaattattaccttt
aaccgcatgacttccaaagcagtcttaaaagatgtggctagggtattagatattccctat
tcagagtcagataaaatggcaaaaatgattcctgtttcacggggcaaaccaactaaatta
aaagtcatgatttctgatgaaactccctgtcctgaatttaaggaaagatacgataatgat
cctcaagttcgtcgctggttagatatggcaattcgtattgaagggactaacaaaaccttc
ggggttcatgcagcaggagtcgttatttcttctgaaccactagatgaaattgtcccgcta
caaaaaaataatgaaggttctgttattactcaatatttcatggaagatttagagtccctt
ggactgctaaaaatggactttttgggtttaagaaatttaacgactattcaaaaaacagca
gagttaattaaacaaaatagaaaggttgaattagacttagatcaattacccttagaagaa
agaaaggccttacaaatcattgcgaaaggaacagccaaaaagctacctgaagatatacaa
aaaacccataaattacttgaaagaggtgatttagaagggatttttcagctagaatcatcg
ggaatgaaacagatagttaaagatctaaaaccatcaggaattgaagatatttcttctatc
ttagcactctatcgtccaggtcctttagatgcgggactcattcctaaatttattaaccgt
aaacatggacaagaaccgattaaatatgaacatcgtttattagaacccattttaaaagaa
acctacgctgttttggtgtatcaagaacaaatcatgaaaatggcacaagatttagcaggg
tattctttaggagaagcggacttattacgtcgcgcaatgggtaagaaaaaaatctccgaa
atggaaaagcatcgggaaaaatttattgaaggtgcagcgaaaaatggagtgatcaaagaa
attgctgaaaatttgtttacccaaatggttcaatttgctgagtattgtttgagttacgat
acagaaattttaactgttgaatatggagcaattcctatcggtaaagtcgtcgaagaaaat
attgattgtacagtgtatacggtggataaaaatggctttgtttatacacaaaatattgct
caatggcatttaagaggtcaacaagaagtgtttgaatattatttagatgacgggtcaatt
cttcgagcaacgaaagatcatcaatttatgactctagaaggagaaatgctacccattcat
gagatttttgaaagagggttagaactgaaaaaaattaaaatctaa
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