KEGG   Rippkaea orientalis PCC 8802: Cyan8802_4475
Entry
Cyan8802_4475     CDS       T00968                                 
Name
(GenBank) WD-40 repeat protein
Organism
cyh  Rippkaea orientalis PCC 8802
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_HPS5 AAA_35 NBCH_WD40 eIF2A Beta-prop_EIPR1 Beta-prop_DCAF4 RMC1_N Nbas_N WD40_RFWD3 WD40_like Beta-prop_Nup120_160 Beta-prop_SPT8 PEP5_VPS11_N PROPPIN Beta-prop_ELP1_1st Beta-prop_WDR75_2nd DUF7165 WD_LRWD1 Mcl1_mid VID27 Beta-prop_IFT122_2nd WDR54 Beta-prop_WDR19_2nd Beta-prop_RIG_1st AAA_22
Other DBs
NCBI-ProteinID: ACV03258
LinkDB
Position
4625913..4629398
AA seq 1161 aa
MNLTTEKPYIYKVGGSLAFDHPTYGERQADRELLDSLKVGKFCYIFNCRQMGKSSLRVRA
MHQLQAEGMSCASVDITSLGSDISQQQWYSGIITQLFLGFNLVGKINLKMWLRERDELSG
VQKFSHFLEEVLLVHCKGEKIYIFIDEIDKVLSLNFSLDDFFTLIRFCYNQRAENKNYER
LVFALFGVATPSDLIREKTQTPFNIGQPIELTGFTLEEVAPLASGLRLIANRPNEVLKAI
LDWTGGQPFLTQKLCQLLLKTLETIPQGQEEETVAKVVKDLIINNWESQDEPVHLKTIRD
RLLRNEKRTGRLLGLYQQILQQGLIEADDSPEQTELRLSGIVVKRDNKLVVYNPIYEAVF
NPKWVSKELEKIRPYSESITAWIASNYEDKSRLLRGQALKDALGWAMDKNLGNIDYQFLT
ASQKLDKREAELNLAAEKEANEILTQANQKAQRMIRIGLGILVVSLVGALISFTQARSAI
QKQQEAKKGSQLEQMGDSAWRQFEFEQLDGLISAMEGVQKLKTIVKDQRILKDYPATRPI
IVLEQILDRIHEKNKLTGHEDAVNSVTFSPNGQLIATASSDGTIRLWDRQGRQKTVITGH
KGNIYRVTFSPDGQLIASASQDNTAKVWNLQGQELMTLKGHNSSVYSVSFSPDSKHLLTT
SRDDTARIWDLQGHQLAILKGHEKSIDHGVFSPDGQRIATASRDGTVRIWDNQGNLLKIL
KDSVDSFYSVSFSPDGQRLASSAKDGTVRIWDNQGKSILTLKGHQELVKNVTYSHDGNWI
ATASSDGTARVWNTQGQEVMVFRGHQDPVYDVAISSNSQELATASSDGTVKLWHINSPQQ
EGFNTLDTYVTAVSVFPDDQLLAIASENGQVYLWNLQGKFLWEFEGHNTGINSLNFSPDG
QKIATADNNGRVKLWDRKGNILAELFDNSVRVYSVTFSSDSNLLAIATRSGEVWLWNIEK
MPPQLIHQFTAHQETIYQLSFSPDGQTLVTASGDKTAKLWDLQGNLQQEFLGHTAQVNGL
AFSPNGQYLLTASEDSTAKLWDLKGNVLATLESDLFPVSRVNFSPDGQKLATASRDGTVR
LWDLEGHLHTQMKGHQEAIGELQFTQDSQQLITIDRDGAVKIWPVQEEFVRLENLFNKGC
QWLQDYLVTNQEEKAKLEACQ
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgaatctaacgacggaaaaaccttatatctataaagtgggtggtagtctcgcgtttgat
catcctacctatggagaacgtcaagctgatcgagagttattagactcattgaaagtaggt
aaattttgttatatttttaactgtcgtcagatgggaaaatcgagccttagagttcgtgcg
atgcaccaactccaagcagaaggaatgagttgtgcatcggtggatattaccagtttaggg
agtgatattagtcaacagcaatggtacagtggcattattacgcaattatttctcggattt
aatctggttggcaaaattaatctgaaaatgtggctacgggaacgagacgaattatcgggg
gtacaaaaatttagccatttccttgaagaagtcttattagttcactgtaaaggcgaaaaa
atttacatttttattgatgaaattgacaaagttctgagtctgaatttttccctagatgat
ttctttactttaattcgcttttgttataatcaacgagcagaaaataaaaactatgaacga
ctggtatttgcattatttggcgtggccactccttccgatttaatccgagaaaaaacccaa
actccttttaacattggtcaacccattgaattgacggggtttaccctagaagaagttgcc
ccattagcatcagggttaagactgattgcaaaccgtcctaacgaggttttaaaagccatt
ttagactggacaggaggacaaccttttttaacccaaaaactctgtcaattgctcttaaaa
accctagaaacgattcctcaaggacaagaagaagaaaccgttgcaaaggttgttaaagac
ttgattattaataattgggaatctcaggatgaacccgtacatttgaagacgatccgcgat
cgccttctccgcaatgaaaaacgaacaggaagactgttaggattatatcaacagattctg
caacagggattaatagaagctgatgatagtcccgaacaaacggaattacgactctcagga
atcgtggttaaacgagataataagctagtggtttataatcctatttacgaagctgttttt
aatcctaaatgggttagtaaagaactcgaaaagattcgcccctattctgaatcgattacc
gcttggattgcatctaattatgaagataagtctcgtttattgcgaggacaagccttaaaa
gatgccctaggttgggcgatggataaaaacttaggcaatattgattatcagtttttaact
gctagtcagaaattagataaacgcgaagcagaattaaatttagctgccgaaaaagaagcc
aatgaaattttaactcaagccaatcaaaaagcccaacgaatgatccgaattgggttagga
attttagtcgtgtctttagttggtgcgctaatttcctttacccaagcaagatcggctatt
caaaagcaacaagaagctaaaaaaggaagtcaattagaacaaatgggagatagtgcttgg
cgacaatttgaatttgaacaacttgatgggttaatatcagcaatggagggcgtacaaaag
ttaaaaactattgttaaagatcaacgaatactaaaagactatccagccactcgtcccatt
attgtcctagaacaaattcttgatcgcatacacgaaaaaaacaaattaactggtcatgaa
gatgccgtcaatagtgttacttttagtcctaatggtcaattaattgccaccgcatctagt
gatggaaccattcgtctgtgggatcgccaaggacgacaaaaaacagttattacaggacat
aaaggtaatatttatcgagtcacttttagtcccgatggtcaacttattgccagcgcatcc
caggataataccgccaaagtttggaacttacaagggcaagaattaatgacacttaaaggt
cacaattcatccgtttatagtgttagttttagtccagatagcaaacaccttctaaccact
tctagggatgacacagccagaatttgggacttacaaggacaccaacttgctatcttaaaa
ggtcatgaaaaatcgattgatcatggtgtatttagtcccgatggtcaacgcattgccaca
gcctcacgggacggaaccgttagaatttgggataatcaaggaaatctcttgaaaatcttg
aaggatagcgtagattctttttatagcgttagttttagtcccgatggtcaacgtttagcc
tcttcggcaaaagatggaactgttagaatttgggataatcaaggaaaatcaatcttaact
ctcaaaggtcatcaagaattagtaaaaaatgtcacctacagtcacgacggcaactggata
gctactgcatcgagtgatggaaccgctagagtatggaacactcaaggacaagaagtgatg
gtctttcgaggccatcaagaccctgtttatgatgtggctattagttccaatagtcaagaa
ttagcaaccgcatcgagtgatggaacagtcaaactttggcacatcaactcacctcagcaa
gaagggtttaatacccttgatacctatgtgacagccgtgagtgtatttcctgatgatcaa
ttattagcgatcgcgtctgaaaatggtcaagtttatctgtggaatttacaaggaaaattt
ctctgggaatttgaaggacacaataccgggattaatagtttgaattttagtccagatggt
caaaaaattgcgacggctgataacaatggccgagttaaattatgggatcgaaaaggaaat
attttagcggaattatttgacaattcagttagggtttatagtgtcacttttagttctgat
agtaatttattagcgatcgctacccgttcaggagaagtttggctatggaatatcgaaaaa
atgcctccccaattgattcatcaatttacagcccatcaagaaactatttatcaactgagt
tttagtcctgatggacaaactttagtcacagcttctggtgataaaacagctaaattatgg
gacttacaaggaaatttacagcaagaatttttaggacatactgctcaggtaaatgggtta
gcttttagtcctaatggtcaatatttattaactgcgtctgaggatagcactgccaaatta
tgggatctcaagggtaatgttttagcaaccttagaaagcgatctttttccagtttcgcgt
gttaattttagtcccgatggccaaaaattagcgactgcatcacgcgatggaacagttaga
ttgtgggatcttgaaggtcatcttcatactcaaatgaaaggacatcaagaagcgattgga
gaattacaatttactcaagatagtcaacagttaataacgatagatagggatggtgcagtc
aagatttggccagtacaagaagagtttgttcgcctagaaaatctctttaataaaggatgt
caatggctacaagattatttagtcactaatcaggaggaaaaagctaaactagaggcctgc
caatag

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