Cyanobium sp. NIES-981: CBM981_0443
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Entry
CBM981_0443 CDS
T04888
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cyi
Cyanobium sp. NIES-981
Pathway
cyi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBM981_0443 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyi03019
]
CBM981_0443 (recQ)
03400 DNA repair and recombination proteins [BR:
cyi03400
]
CBM981_0443 (recQ)
Enzymes [BR:
cyi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBM981_0443 (recQ)
Messenger RNA biogenesis [BR:
cyi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CBM981_0443 (recQ)
DNA repair and recombination proteins [BR:
cyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CBM981_0443 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
SBO42154
LinkDB
All DBs
Position
I:complement(361330..363225)
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AA seq
631 aa
AA seq
DB search
MSAPVPLDPPMDPPAPPGARACADPQAVLQQVFGYRTFRGPQEEIVRHVIGGGSGLVLMP
TGGGKSLCYQVPALCRPGLAVVVSPLIALMQDQVEALQQAGVRAEALHSALTAEQTSTVW
QQLGRGQLDLLYVSPERLLGGDLLERLAERELALFAIDEAHCVSQWGHDFRPEYIQLAVL
AERFPAVPRLALTATADPRSREEIVARLRLEHGRVFLASFDRPNIRYLLRAKEDPKAQLL
QFLEQHRGEAGIVYARSRARVERFAADLRAAGFDALGYHAGMEAEQRSRTLQQFRNGSGV
VVVATIAFGMGIDKPDVRFVAHVDLPKSLEAYYQETGRAGRDGLPAVAWMVHGPGDIPQL
RRFIDDGESPEAQKRIEHGKLDALIGFTEAPGCRRQVLLQHFGEQLAEPCGNCDGCLEPQ
ERVDVTEPARKALSAVYRTGQRFGAAHVVDVLLGGSTERIRSLGHDGLSVYGIGRELDRS
QWRTLLRQLTSAGYLQPVPEGHGGLCFGAEALVKPLLRGETRLELPLPPPRKERRRSHAG
AGTGWGTAGSGAELGELDDTLVAALKAWRREQARQQGVPPYVVFHDRTLLELAGRRPADL
GELAGVSGIGAAKLERYGEALLAVLATAGAS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgccccggtgcccctcgatccaccgatggatccgcccgcccctcccggcgcccgc
gcctgcgccgatccccaggccgtgctccagcaggtgttcggctaccggaccttccgcggg
ccccaggaggagattgtgcgccatgtgatcggcggcggctccggcctggtgctgatgccc
accggtggcggcaagtcgctctgttatcaggtgccggcgctgtgccggccggggctggcg
gtggtggtctcgcccctgatcgccctgatgcaggaccaggtggaggccctgcagcaggcg
ggcgtgcgggctgaggcgctgcattcggccctcacggcggagcagacgagcacggtgtgg
cagcagctcggtcgcgggcagctcgatctgctctacgtgtcgccggaacggctgctgggg
ggcgatctgctcgagcggctggcggagcgggagctggccctgttcgccatcgatgaggcc
cactgcgtgtcccagtggggccacgacttccgtcccgaatacatccagctggcagtgctg
gccgagcgcttcccggcggtgccgcggctggccctcacggccaccgccgacccccgcagc
cgggaggagatcgtggcgcggctgcggctggagcacggccgggtgttcctggccagcttc
gaccggcccaacatccgctatctgctgcgggccaaggaggacccgaaggcccagctgctg
cagtttctggagcagcaccggggcgaggcgggcattgtgtatgcccgctcgcgggcccgg
gtggagcgcttcgcggcggatctgcgggccgccggcttcgatgccctcggctaccacgcc
ggcatggaggcggagcagcgcagccgcaccctgcagcagttccgcaacgggagcggcgtg
gtggtggtggccacgatcgccttcggcatgggcatcgacaagcccgacgtgcgcttcgtg
gcccacgtggacctgcccaagagcctggaggcctactaccaggaaacgggccgggccggc
cgcgacggcctgccggccgtggcctggatggtgcatggccccggcgacatcccccagctg
cgccgcttcatcgacgacggggaatccccggaggcccagaagcgcatcgagcacggcaag
ctcgatgccctgatcggcttcaccgaggcccccggctgccgccgccaggtgctgctgcag
cacttcggcgagcagctggccgaaccctgcggcaactgtgacggctgcctcgagccccag
gagcgggtggatgtcaccgagccggcccgcaaggccctctccgccgtgtaccgcaccggc
cagcgcttcggagccgcccatgtggtggacgtgctgctggggggcagcaccgaacggatc
cgcagcctcggccacgacggcctgagcgtgtacggcatcggccgggagctcgaccgcagc
cagtggcgcaccttgctgcgccagctcaccagcgccggctatctgcagcccgtgcccgag
ggccatggcggcctctgcttcggggctgaggcgctggtgaagccgctgctgcggggagaa
accaggctggagctgccgctgccgccgccccgcaaggagcgtcggcgcagccacgccggc
gccggcacgggctggggtacggccggttcaggcgcggagctgggcgagctggacgacacc
ctggtggccgccctcaaggcctggcggcgcgagcaggcccgccagcagggggtgccgccc
tacgtggtgttccacgaccgcaccctgctggagctggccgggcgccgccccgccgatctg
ggggagctggccggggtgagcggcatcggcgccgccaagctggagcgctacggggaggcg
ctgctggcggtgctggccaccgcaggggcgagttag
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