Cyanobium sp. NIES-981: CBM981_0523
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Entry
CBM981_0523 CDS
T04888
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cyi
Cyanobium sp. NIES-981
Brite
KEGG Orthology (KO) [BR:
cyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyi03400
]
CBM981_0523
DNA repair and recombination proteins [BR:
cyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBM981_0523
Archaeal homologous recombinant proteins
CBM981_0523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
YscO
Seryl_tRNA_N
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
SBO42234
UniProt:
A0A182AL20
LinkDB
All DBs
Position
I:complement(438948..441989)
Genome browser
AA seq
1013 aa
AA seq
DB search
MRPHLLEMEAFGPYADPVTICFDTLCRDGLFLIHGSTGAGKTYLLDALCFALYGEVSGER
SLKGLRSDHAPPQSLPQVSLEFSAAGGRWRVERQAACEVAKSRGQGTTSKGAKAALWRLQ
GGEPQPLASGVQEVGREVARLVGLDAAQFRQVILLPQGRFAEVLRARDEDREALLKTLFD
TSLYERAMGWLAGQAKTAEEGLRERQRQQRHLLEQIAAAWEPWQRERQAAEEPSTELPFE
LLPEHLPTVQGAMGALEREAALSLDRAEARFLQAQAGLAELRGWAELWDRRHRAQARLQE
LTQQHGAMAALQARLALAERAETLRSSVLSEAEARQRREEAEARCGQQLERLRRLRDAAS
QAPDAVMALSPLELPEPPQLTAALNALAVRQGELEQLLTLAAERRQAQREVEQAQQARQE
ATDRIARGQALLAQEQARLDGLQQPLLQARSARDGLHGLELAAGQAARLTTALQQRQEAD
RQLQKASAAVLAAEAAQQQARGHQLDLRERQLQGMAARLAADLQAGEPCPVCGSRHHPQP
APEAADAVADTAMAAAERQLEETGRVLVAARSAQARVQAQLEALEGQLQAGGMTTLAAAK
AEAARAVAALEAARRQAGALDALEAERQQAEQRLQHYRERLQQRENELISCRQGLAQQEK
GLADLTRRIHAGLGGDHDPAALLQRIQGLMRSLESLIDAARERALALSREAEAQRRLAGD
LAGAGFSDPQALLQALVPEAERLGWSRTLQQYTADQALAQGVLAELAGQELPEKRPDLPA
AETLLAAADAARRDALARFTRAETALTAITGLIERHGSGAAALAAQQRQADLVQGVAARC
LGQSDPHISLQRWVLSAYLEEICGYANQRLSQMTAGRYELRLSDGSGQRRGSKAGLGLRV
LDAYTGEEREVSSLSGGETFQASLALALGVADTVQAHSGGVVLEALFIDEGFGSLDPDSL
HLAMDELDRLREGGRMIGLISHVAALRERIRTGLEVVASERGSRVVVGTLEAA
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccccacctgctggagatggaagccttcggtccctacgcggacccggtgacgatc
tgcttcgacaccctctgccgcgacggcctgttcctgatccacggcagcaccggtgccggc
aagacctacctgctcgatgccctctgcttcgcgctctacggcgaggtgagtggcgaacgc
agcctcaaggggctgcgctccgatcacgccccgccccagtccctgccgcaggtgagcctg
gagttctcggcggcgggcggccgctggcgggtggaacgccaagccgcctgcgaggtggcg
aagagtcggggccagggcaccaccagcaagggggccaaggccgctctgtggcggctgcag
ggcggggagccgcagccgctggcctccggcgtgcaggaggtggggcgggaggtggcgcgg
ctggtgggcctcgatgccgcccagttccgccaggtgatcctcctgccccaggggcgcttc
gccgaggtgctgcgcgcccgggacgaagaccgggaggccctgctcaagaccctgttcgac
acttcgctctatgaacgggccatgggctggctggcgggacaggccaagacggccgaggag
gggctgcgggagcggcagcggcagcagcgccacctgctggagcagatcgccgcagcctgg
gaaccctggcagcgggagcggcaggccgccgaggagccgtcaacggagctgcctttcgag
ctcctccccgagcatctccccacggtgcagggtgcgatgggggccttggagcgcgaggcc
gccctgagcctggatcgggccgaggcacggtttctgcaggcccaggcgggcctggccgag
ctccggggctgggccgagctctgggaccgccgccaccgcgcccaggcacggctgcaggag
ctgacccagcagcatggggccatggccgcgctccaggcgcggctggcgctggcggaacgg
gccgagacgctgcgctccagcgtgctgtccgaagccgaggcccgccagcgacgggaggag
gcggaggcccggtgcggccagcagctggagcggctgcggcgcctgcgggatgccgcctcg
caggcccccgatgcggtgatggcgctcagcccgctggagctgcccgaacccccgcagctc
accgcagcgctgaacgctctggccgtgcggcagggagaactggaacagctgctcacgctc
gccgcggagcggcggcaggcgcagcgggaggtggagcaggcccagcaggcccgtcaagaa
gccaccgaccgcatcgcccgcggccaggcgctgctggcccaggaacaggcgcggctcgat
ggcctgcagcagcccctgctgcaggcccgcagcgcccgtgacgggctccatggcctggag
ctggccgctgggcaggccgctcgcctcaccacggccctccagcagcggcaggaggcggac
cggcagctgcagaaggccagcgcggcggtgctggcggccgaggccgcccagcagcaggcc
aggggccaccagctggatctgcgcgaacgccagctgcaggggatggcggcccggctggcc
gcggatctccaggcgggcgagccgtgcccggtgtgtgggtcgcggcaccatccccagccg
gcgccagaggctgccgatgcggtggccgacacggccatggcagcggccgaacgccagctg
gaggaaaccggccgggtcctggtggccgcccgctccgcccaggcacgtgtgcaggcccag
ctggaggcgctggagggccagcttcaggcgggcgggatgactacgctcgcggccgcgaag
gccgaagcggccagggccgtcgccgcgctggaggcggcccgcaggcaggccggcgccctg
gacgccctggaggccgaacggcagcaggcggagcagcggctgcagcactaccgggagagg
ctgcagcagcgggagaacgaactgatcagctgtcgccaggggctggcgcagcaggaaaag
ggcctggccgacctgacccggcggatccatgccgggctggggggagaccacgaccctgcc
gcgttgctccagcggatccagggcctgatgcgctccctcgagagcctgatcgacgccgcc
cgggagcgcgccctcgccctcagccgcgaggcggaggcgcagcgccgtctggccggcgat
ctggccggcgcggggttcagcgatccccaggcgctgctgcaggcgctggtccccgaagcc
gagcggctgggctggagccgcaccctgcagcagtacacggcggatcaggccctggcccag
ggcgtcctggccgagctggccggccaggagctgccggagaagcggccggatctgccggcc
gccgagaccctgctcgcggcggcggatgcggcccgtcgcgacgctctggcccgcttcacc
cgcgccgaaaccgccctcacggcgatcaccgggctgatcgaacgccacggatcgggtgca
gcggcactggccgcccagcagcggcaggccgatctggtgcagggcgtggccgcccgctgc
ctggggcagagcgatccccacatctcgctgcagcgctgggtgctctcggcctacctggag
gagatctgcggctacgccaaccagcgcctcagccagatgacggccggtcgctacgagctg
cgcctctcggacggctcgggccagcgccgcggcagcaaggcggggctgggcctgcgggtg
ctggatgcctacaccggcgaggagcgggaggtgtcgagcctctcgggaggcgaaaccttc
caggcctccctcgccctggccctgggggtggcggatacggtgcaggcccacagcggcggc
gtggtgctggaggcgttgttcatcgacgagggcttcggcagcctcgatcccgacagcctg
cacctggccatggacgagctggaccgcctgcgggagggcggtcgcatgatcggcctgatc
agccatgtggcggcgctgcgcgagcggatccgcaccggtctcgaggtggtggccagcgag
cggggatcgcgggtggtggtgggcaccctggaggccgcgtga
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