Cyanobium sp. NIES-981: CBM981_0574
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Entry
CBM981_0574 CDS
T04888
Symbol
sigF
Name
(GenBank) Group3 RNA polymerase sigma factor SigF1
KO
K03090
RNA polymerase sigma-B factor
Organism
cyi
Cyanobium sp. NIES-981
Brite
KEGG Orthology (KO) [BR:
cyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyi03021
]
CBM981_0574 (sigF)
Transcription machinery [BR:
cyi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CBM981_0574 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_r4
HTH_30
HTH_38
HTH_28
Sigma70_ECF
HTH_Tnp_4
tRNA_edit
Motif
Other DBs
NCBI-ProteinID:
SBO42285
LinkDB
All DBs
Position
I:488976..489734
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AA seq
252 aa
AA seq
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MSTPSSLRPSTSVQARNRRVEQYRSLVRPIALHYHRRCAEPLDDLIQVGLLGLLRAAELY
RPATTTPFEAFARPHVRGALLHYLRDVALPIRLPRRLDEQRLQLARLRSTWLASHHRPAT
EQELRDQLGLDQGQWTLLQAAEQLVRVQSLEAWLDDGSEQPSTALEPQASDAGSADGTAA
ASVLLAGLEEPLRLVVERVILAGWSYRRTAAWLQVSPMTVQRRLRRALGLLRDCLVSPEP
GLRPAASVAPGC
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccccctcctcccttcgcccctccacttccgttcaggcccgcaaccggcgggtc
gagcagtacaggtccctggtgcggccgatcgctctccactaccaccgtcgctgcgccgaa
cccctggacgatctcatccaggtgggtctgctcggcctgctgcgggccgctgagctctac
cgaccggccaccaccaccccgttcgaggcctttgcccggccccatgtgcgcggcgccctg
ctgcactacctgcgggacgtggctctgccgatccggctgccacggcggctggatgagcaa
aggctccagctggcgcgcctgcgcagcacctggctggccagccaccatcggcctgccacc
gagcaggaactgcgggaccagctgggccttgaccagggccagtggaccctgctgcaggcg
gcggagcagctggtgcgggtccagtcgctcgaagcctggctggatgacggctccgagcag
ccctccaccgcgctggagccccaggcttccgatgcaggttcggcagacggcacggccgcc
gcttcggtcctgctggccgggcttgaagagcccctgcggctggtggtggagcgggtgatc
ctggccggctggagctaccgccgcacagctgcctggctgcaggtgagcccgatgacggtg
cagcgccgcctgcgccgtgccctggggctgctgcgtgactgtctggtcagtcctgagccg
gggttacgtcccgctgcatctgttgctccagggtgctga
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