Cyanobium sp. NIES-981: CBM981_1158
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Entry
CBM981_1158 CDS
T04888
Symbol
recB
Name
(GenBank) Exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cyi
Cyanobium sp. NIES-981
Pathway
cyi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CBM981_1158 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyi03400
]
CBM981_1158 (recB)
Enzymes [BR:
cyi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CBM981_1158 (recB)
DNA repair and recombination proteins [BR:
cyi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBM981_1158 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
AAA_25
PDDEXK_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
SBO42869
UniProt:
A0A182AN45
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All DBs
Position
I:1049002..1052733
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AA seq
1243 aa
AA seq
DB search
MTERFDAHTFPLDPGLRLLEASAGTGKTFSLAHLVLRYLSEAQVPWRQLLVVTFTNAAAA
ELRDRIGRRLQQALIGLEQEAPSQGSPDPSLAAWLRWARPRADLLRAPLLLALEELDGAD
ITTIHGFCLRTLQRQALEAGHPPELQLETDATPLVRQVCHDYWRQQVLALPLHLLEGVQT
FVKGPEALVSVVQRLDGDPALELDPLPDGMGADHPLAPQLQALWDRRWMEFRQLWQQGGE
ALEADLRSAAGQWRAQGHSKTTPYSPRPRKDRHQEVTAWIAGQGSAGNYAATLGQKELVD
YFHPGAFLKVARPIEASAAGDRGLEPSLPQRPLMEAVAALREGPAEALLLHAAHWGCREL
ARRRERQGRMGYGQLLQCLDPGDDPNAPSPLLDAVGERYSAVLVDEFQDTDPIQWRILCR
AFDSPRHRLVLVGDPKQAIYRFRGGDLATYRRAFQAAAAGGGISRLDTNYRATASLIAGL
NTLMAAGLGRSGLEVPPVRPRPSPPAEGGTDAGRGGPPLALLWLGGNRQAGEAATTATAL
EQELPGRIASQVAAEIRAGEAPGDLCLLVNTHHQAGQLRMALARAGIASRLVSNGDVFAS
PGATALQRLLDGLAHPGDPRRLRLLAASPLLGWSAAAVAAATPEQWNQLSETLLRGRDGL
ASQGLLGVLAALLDEEGLARLGRGGRLLADLHQCATLLQERIHSDQLGAAAAAEWLRQRR
LAPDPSPPESHQPNSDVEDEAVWVVTVHRSKGLEYPVVICPYLWKAPNPSPPGPGLRWHP
PDRPGPVLDLHLSSRWGRGHQALVQHRAADLQEAERRAYVACTRARRRLLLAWGPVKGQA
GNPLHPWLLGQAPPPDPDDDPYLAQGDDELRQTLEREIAAREVPMTLVALPEAGAPPPAI
PPATAQGPLELGPVPVRRLDLGWGRSSYTSWTRGSHAAAPQALEEGRETDALVREPELEA
PEQELWPGESPLAAFPRGSQAGDCLHRILETLDYQQPAAMQADPVLRELGRSGIASDHLE
AVLTGLERLRLSPMGGPLGSFRLAGLARDARINEMNFDLTLGPVDSDALARPFREHPGGS
FGATYASQLATLPIRGRGFLTGSIDLVFCHRGRWWVADWKSNWLGERGADGQPCRCGPRH
YGPEALTALMAANHYPLQAHLYLVALHRYLRWRLGGYDPARHLGGYAYVFLRGVAEASDT
LLEGAEAGAPLPGLAVECPPLERLLALDMALDPGLGQARGTAA
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacgctttgatgcccacacctttccgctggacccgggcctgcggctgctcgag
gccagtgccggcacggggaaaaccttctccctcgcccatctggtgctccgctacctgagc
gaagcccaggtgccatggcgccagctgctggtggtgaccttcaccaatgcggcggccgct
gagctgcgcgacaggatcggccggcggctgcaacaggccctgatcggcctcgagcaggag
gccccttcccaggggtcaccggaccccagcctggcagcctggctccgctgggcacggccc
cgggccgacctgctgcgggcgccgctgctgctggcgctggaggagctggacggcgcggac
atcaccaccatccatggcttctgcctgcgcaccctgcagcgccaggccctggaggccggc
cacccccccgagctgcagctcgaaaccgacgccaccccgctggtgcgccaggtgtgccac
gactactggcgccagcaggtgctcgccctgcccctgcacctgctggagggagtgcagacg
ttcgtgaagggtccggaagcgctggtgagcgtggtgcagagactcgacggcgatccggcg
ctggagctggatccgctaccggacggcatgggggccgaccaccccctggccccgcaactg
caggccctgtgggaccgccgctggatggagtttcggcagctgtggcagcagggcggcgag
gccctggaggcggacctgcgctccgccgccggccagtggcgcgcccagggacacagcaag
acgaccccctacagccccaggccgcggaaggaccgccaccaggaggtgacggcctggatc
gcaggacagggcagtgcgggcaactacgccgccaccctcgggcagaaggagctggtggac
tacttccaccccggggccttcctgaaggtggcccgaccgatcgaggcttccgccgccggc
gaccgcggcctggagcccagcctgccccagcgccccctgatggaggcggtggctgccctg
cgggaggggccggcggaggcgctcctgctgcatgccgcccactgggggtgccgcgagctg
gcccgccgccgcgagcgccagggacgcatgggctacggccagctgctccagtgcctcgat
cccggcgacgaccccaacgcgccgtctcccctgctggacgcggtcggggagcgctacagc
gccgtgctggtggacgagttccaggacaccgacccgatccagtggcggatcctgtgccgg
gcattcgattccccgcgccaccggctggtgctggtgggcgatcccaagcaggccatctac
cgcttccgcggcggcgacctggccacctaccggcgggcgttccaggccgccgcggccgga
ggcggcatcagccggctcgacaccaactaccgcgccaccgcttccctgatcgccggcctc
aacaccctgatggcagcgggcctgggccgctccggcctggaggtgccgccggtgcggccc
aggccctcccccccagccgagggcggcaccgacgcaggacgcggaggcccgcccctggcc
ctgctgtggctggggggcaaccgccaggccggtgaagccgccaccaccgccacggcgctg
gagcaggagctgcccggccggatcgccagccaggtggccgccgagatccgggccggcgag
gccccgggcgatctctgcctgctggtgaacacccatcaccaggccgggcagctgcggatg
gccctggcccgcgccggcatcgccagccggctggtgagcaacggggatgtgttcgccagc
cctggcgccacggccctgcagcggctgctggatggcctggcccatcccggcgatccgcgc
cggctgcggctgctggcggcttcacccctgctgggctggagcgccgccgccgtcgctgcc
gccaccccggagcagtggaatcagctcagcgagaccctgctgcggggccgtgacgggctg
gcctcccaggggctgctgggggtgctggcggcactgctggacgaggaggggctggcgcgg
ctgggccggggcggacgcctgctggcggatctccaccagtgcgccacgctgcttcaggaa
cggatccacagcgaccagctgggggcggccgcggccgcggagtggctgcggcagcggcgc
ctggcgccggacccctccccccccgagagccaccagcccaacagcgacgtggaggatgag
gcggtgtgggtggtgacggtgcaccgcagcaagggcctcgagtatccggtggtgatctgc
ccctacctgtggaaagcccccaaccccagcccaccggggcccggcctgcgctggcatccc
ccggatcgccccggaccggtgctcgacctgcacctcagcagccgctggggccggggccat
caggcgctggtgcagcaccgggccgccgacctccaggaggcggagcggcgggcctacgtg
gcctgcacccgcgcccgacggcgcctgctgctggcatgggggcctgtgaaggggcaggcg
ggaaaccccctgcacccctggctgctgggccaggctccgccgccggaccccgacgacgat
ccctatctggcccagggggatgacgagctgcgccagaccctggagcgggagatcgccgcc
cgggaggtgccgatgaccctggtcgcgctgcccgaggccggcgccccaccgccggccatc
cccccagccacggcccaggggccgctggagctgggcccggtgccggtgcgccgcctcgat
ctcggctggggccgcagcagctacacgagctggacccggggcagccacgccgcagcgccc
caggccctggaggagggccgggaaaccgacgccctggtgcgcgagcccgagctggaggca
ccggagcaggagctctggcccggggagagtccgctggcagccttcccgcggggatcccag
gccggcgactgcctgcaccggatcctggagaccctcgactaccagcaacccgccgccatg
caggccgatcctgtgctgcgggagctcggccgcagcggcatcgccagcgatcacctggag
gccgtgctgacggggctcgagcggctgcggctgagcccgatgggcggccccctgggcagc
ttccgtctggccgggctggcccgcgacgcccgcatcaacgagatgaacttcgatctcacc
ctggggccggtggacagcgacgccctggcccgccccttccgggagcacccgggcggcagc
ttcggggccacctacgccagccagcttgcgaccctccccatacggggccgcggcttcctc
accggctcgatcgatctggtgttctgccatcggggccgctggtgggtggccgactggaag
agcaactggctgggcgaacggggggccgacggccagccctgccgctgcggaccgcggcat
tacgggccggaggccctcacggccctgatggcagcgaaccactaccccctccaggcccac
ctctacctggtggccctgcaccgctacctgcgctggcgtctgggcggctacgaccccgcc
cgccacctgggcggctacgcctacgtgttcctgcgcggcgttgcggaggcctcggacacg
ctgctggagggggccgaggccggtgccccgctgccggggctggccgtggaatgcccaccg
ctggaacgcctgctcgccctggacatggccctggatccgggcctgggccaggcccggggg
accgccgcatga
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