Cyanobium sp. NIES-981: CBM981_1822
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Entry
CBM981_1822 CDS
T04888
Symbol
rnd
Name
(GenBank) RNAse D protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cyi
Cyanobium sp. NIES-981
Brite
KEGG Orthology (KO) [BR:
cyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyi03016
]
CBM981_1822 (rnd)
Enzymes [BR:
cyi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CBM981_1822 (rnd)
Transfer RNA biogenesis [BR:
cyi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CBM981_1822 (rnd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
BE_C
Motif
Other DBs
NCBI-ProteinID:
SBO43521
UniProt:
A0A182ARC5
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All DBs
Position
I:complement(1614279..1614953)
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AA seq
224 aa
AA seq
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MTTTPTSNLPSPARFAVFDGDLDADWAELYAGARALAVDTEAMGLIHGRDRLCLVQICDD
ADNVCCIRLRRGQRSAPRLQALMENTAIEKVFHFARFDVAALAENLGIAVDPIFCTKIGS
RLARTYSPRHGLKDVVQELVGVELDKRAQSSDWGEVEDLTEAQLAYAAGDVRYLLQARDR
LERMLRREERWELAQRCFTCLPVFADLDRQRFHLLFEHSSGGNR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacccccaccagcaacctgccgtccccggcccggttcgccgtgttcgacggc
gatctcgacgccgactgggcggagctctacgccggtgcgcgggccctggcggtggacacc
gaggcgatgggcctgatccacggccgcgaccggctctgcctggtgcagatctgcgacgac
gcggacaacgtgtgctgcatccggctccgccggggtcagcgctcggccccgcgcctgcag
gccctgatggagaacacggccatcgagaaggtgttccacttcgcccgcttcgatgtggcc
gccctggccgagaacctcggcatcgccgtggatccgatcttctgcaccaagatcggcagc
cgtctggcccgcacctacagcccccggcacggcctcaaggatgtggtgcaggagctggtg
ggggtggagctcgacaagcgcgcccagagctcggactggggggaggtggaggatctcact
gaggcccagctggcctacgccgccggcgacgtgcgctacctgctgcaggcgcgcgaccgg
ctggaacggatgctgcggcgcgaggagcgctgggagctggcccagcgctgcttcacctgc
ctgccggtattcgccgacctcgatcgccagcgcttccatctgctgttcgagcactccagc
ggcggcaaccgctga
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