Cyanobium sp. NIES-981: CBM981_2218
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Entry
CBM981_2218 CDS
T04888
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
cyi
Cyanobium sp. NIES-981
Pathway
cyi00541
Biosynthesis of various nucleotide sugars
cyi01100
Metabolic pathways
cyi01250
Biosynthesis of nucleotide sugars
Module
cyi_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
cyi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CBM981_2218 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cyi01005
]
CBM981_2218 (kdsA)
Enzymes [BR:
cyi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
CBM981_2218 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
cyi01005
]
Lipid A
CBM981_2218 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Defensin_1
Motif
Other DBs
NCBI-ProteinID:
SBO43917
UniProt:
A0A182APU7
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All DBs
Position
I:2005619..2006440
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AA seq
273 aa
AA seq
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MTFRLIAGPCVIESRDLVLQVAERVSGLCRELGITYVFKASFDKANRSSGKSFRGPGPDE
GLRILQEVREQLGIPVLTDIHESHQAAAAAEAVDVLQIPAFLCRQTDLVEAAARAVAGTD
KVVNVKKGQFLAPWDMAQVVNKLRECGLEPESGRLWLTERGSSFGYNTLVVDYRGLPQMQ
ALGCPVIFDATHAVQQPGGQGTTSGGQREFVAPLARAAVAVGADGLFMEVHPDPTVALSD
GPNMVPLHRLEALLRQLMALRAVVEHGLAVSTL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaccttccgcctgatcgccggaccctgcgtgatcgagagccgcgatctggtgctgcag
gtggcggagcgggtgagcggcctgtgccgtgagctgggcatcacttatgtgttcaaggcc
agcttcgacaaggccaaccgcagctccggcaagtcgttccgggggccgggccccgacgag
ggcttgcgcatcctgcaggaggtgcgcgagcaactgggcatccccgtgctcaccgacatc
cacgaaagccaccaggccgccgcggccgctgaagcggtggacgtgctgcagatcccggcc
ttcctctgccgccagaccgacctggtggaggccgccgcccgggccgtggccggcaccgac
aaggtggtgaacgtgaaaaagggccagttcctggcaccctgggacatggcccaggtggtg
aacaagctgcgggaatgcggcctggaaccggaaagcggccgcctctggctcaccgagcgg
ggctcgagcttcggttacaacaccctggtggtggattaccgcggcctgccccagatgcag
gcgctgggctgtccggtgatcttcgatgccacccacgccgtgcagcagccgggcgggcag
ggaaccacctcggggggccagcgggaattcgtggcgcccctggcgcgggcggccgtggcg
gtgggggccgacggactgttcatggaggtgcaccccgatcccaccgtggccctcagcgac
gggccgaacatggtgccgctgcaccggctggaggccctgctgcgccagctgatggcgctg
cgggccgtggtggagcatggcctggccgtgagcaccctctga
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