Cyanobium sp. NIES-981: CBM981_2689
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Entry
CBM981_2689 CDS
T04888
Symbol
ffh
Name
(GenBank) Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cyi
Cyanobium sp. NIES-981
Pathway
cyi02024
Quorum sensing
cyi03060
Protein export
cyi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cyi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CBM981_2689 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CBM981_2689 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CBM981_2689 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cyi02044
]
CBM981_2689 (ffh)
Enzymes [BR:
cyi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CBM981_2689 (ffh)
Secretion system [BR:
cyi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CBM981_2689 (ffh)
Eukaryotic Sec-SRP protein
CBM981_2689 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_16
AAA_22
AAA_33
APS_kinase
ArsA_ATPase
ParA
AAA_30
cobW
MeaB
AAA_31
MMR_HSR1
Fer4_NifH
AAA_17
Thymidylate_kin
AAA_25
nSTAND3
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
SBO44388
UniProt:
A0A182AS68
LinkDB
All DBs
Position
I:2453391..2454875
Genome browser
AA seq
494 aa
AA seq
DB search
MFDELSQRFEDAVKNLRGQGAISETNIEGALKDVRRALLEADVSLPVVKDFVDEVRRKAV
GAEVVRGISPDQKFIQVVHEQLVDTMGGENAPLAAGGKPGEPSVVLMAGLQGAGKTTATA
KLGLHLKEQGRRALLVGADVYRPAAIEQLRTLGGQIGVEVFSLGTEAKPEDIAAAGVAKA
REEGHDTVLVDTAGRLQIDASMMEEMVRIREAVQPDEVLLVVDSMIGQEAAELTRAFHAQ
VGITGAVLTKLDGDSRGGAALSIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGD
VLTLVEKAQKEVELADVARMQQKLQEASFDFSDFVQQMRLIKRMGSLGGLMKMIPGMNKI
DDGMLKQGEQQLGKIEAMISSMTAAERENPDLLASMPSRRRRIAQGSGHTPAEVDKVLAD
FQRMRGFMQQMTKGGGMPGMPGMGGMPGMGGGFPGMGGFPGMPGMGGPAGPGGRGGGSRK
ANRPPKKRKGFGQL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgagctctcccagcggtttgaagacgccgtcaagaacctgcgcggccagggg
gcgatcagcgaaaccaacatcgagggcgccctgaaggacgtgcgccgggcgctgctggag
gcggacgtgagcctgccggtggtgaaggacttcgtggacgaggtgcgccgcaaggccgtg
ggcgccgaggtggtgcgcggcatcagcccggatcagaagttcatccaggtggtgcacgag
cagctcgtcgacaccatggggggcgagaacgcaccgctggcggcggggggcaagcccggc
gaaccctcggtggtgctgatggccggtctgcagggtgccggcaagaccaccgccaccgcc
aagctgggcctccatctcaaggagcagggccggcgggccctgctggtgggagccgacgtg
tatcggccggcggccatcgagcagctcaggaccctgggggggcagatcggggtggaggtg
ttcagcctcggcaccgaggcgaagcccgaggacatcgccgccgccggcgtggccaaggcc
cgcgaggaggggcacgacacggtgctggtggacaccgccggccgcctccagatcgacgcg
tcgatgatggaggagatggtgcggatccgcgaggccgtgcagcccgatgaggtgctgctg
gtggtggattcgatgatcggccaggaggccgccgaactcacccgtgccttccacgcgcag
gtgggcatcaccggcgccgtgctcaccaagctcgacggcgactcccgcggcggcgccgcc
ctctcgatccgcaaggtgagcggcgccccgatcaagttcatcggcaccggagagaaggtg
gaggcgctccagccgttccaccccgagcggatggccagccggattctgggcatgggcgat
gtgctcaccctggtggagaaggcccagaaggaggtggagctggccgatgtggcgcggatg
cagcagaagctgcaggaggccagcttcgacttctccgacttcgtgcagcagatgcggctg
atcaagcggatggggtccctggggggcctgatgaagatgatcccggggatgaacaagatc
gacgacggcatgctcaagcagggggagcagcagctcgggaagatcgaggcgatgatcagc
tcgatgaccgccgccgagcgggagaatcccgacctgctggcctcgatgccctcccgccgg
cgccgcattgcccagggcagcggccacacccccgccgaggtggacaaggtgttggccgat
tttcagcggatgcggggcttcatgcagcagatgaccaagggcggcggcatgcccgggatg
cccgggatggggggcatgcctggcatgggcggcggcttccccggcatggggggctttccc
ggcatgccggggatgggcggcccggcgggtccaggcggcagagggggtggaagccgcaag
gcgaaccggccaccgaagaagcggaagggcttcggccagctctga
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