Gloeothece verrucosa: Cyan7822_1402
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Entry
Cyan7822_1402 CDS
T01310
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cyj
Gloeothece verrucosa
Brite
KEGG Orthology (KO) [BR:
cyj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyj03021
]
Cyan7822_1402
Transcription machinery [BR:
cyj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cyan7822_1402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_10
HTH_11
HTH_28
MerR_1
HTH_24
HTH_29
MerR
HTH_53
DUF3791
Homeodomain
PI3K_p85B
Motif
Other DBs
NCBI-ProteinID:
ADN13400
UniProt:
E0UIU1
LinkDB
All DBs
Position
1538096..1539052
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AA seq
318 aa
AA seq
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MKTAKNPTDPVRAYLREIGRVPLLTHEEEIVLAKRVQRSMALQEIKDTLTKNLSREPLEH
EWAEAAKISEEELRRTMAAGKAAKEKMVEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQ
KQGRAATISELAQELELTPRQVREYLERARQPLSLDLRVGDNQDTELGELLEDTGTSPED
YATHSSLQLDLEKLMSDLTPQQREVLALRFGLVDGQPLTLAKIGVRLNISRERVRQIERE
ALSKLRKRKANIKEYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgctaaaaatcctaccgatcctgtacgtgcttatcttagagaaattggtcgt
gttcccctactaactcatgaagaggaaatcgttttagctaaacgggtacagcgctccatg
gccttacaggaaattaaagacactttaacaaaaaacctatcgcgcgaacctcttgagcat
gaatgggccgaagcggccaaaatcagcgaagaagaattgcgtcgtacgatggctgccggc
aaagccgccaaagaaaaaatggtagaggctaatttacgcttagtggtatctgtagctaaa
aaatacctcaaacgcaatttagatttattagacttgattcaagaaggaaccatcggtatg
cagcgaggagtggaaaaatttgatcccaccaaagggtatcgattttctacttatgcttat
tggtggattcgtcaagccattactcgcgccatcgcggaaaaaagccgtacaattcgtctg
ccgatccacattaccgaaaaattaaataaaattaagaaagcacaacgccaactggctcag
aaacagggacgggctgcaacgatatcagaactagcacaagaactagagttaactcctaga
caagttcgggaatacttagaacgggcacgtcaacctctttccctagatctaagggtagga
gataaccaagacaccgaactcggagaactcttagaagataccggcacctctccagaggat
tatgcaacccattcttctttgcaactggacctagaaaaactcatgtcagatctgactccc
caacaacgggaagtgctggctttacgatttggtttagttgatgggcaacccctaacctta
gctaaaattggtgttcgtttgaacattagtcgagaacgggttagacaaattgagcgagaa
gcactttctaaattgcgaaaacgcaaggctaatattaaagaatatctcgctagttaa
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