Gloeothece verrucosa: Cyan7822_1776
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Entry
Cyan7822_1776 CDS
T01310
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cyj
Gloeothece verrucosa
Pathway
cyj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cyan7822_1776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyj03019
]
Cyan7822_1776
Messenger RNA biogenesis [BR:
cyj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Cyan7822_1776
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ADN13763
UniProt:
E0U8L7
LinkDB
All DBs
Position
1943565..1945400
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AA seq
611 aa
AA seq
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MSNNETQSKLKIIPLGGLHEIGKNTCIYEYEDEILMVDAGIAFPTDDMHGVNIVLPEMTY
LRENHQKIKGMIATHGHEDHIGGIPYHLKQFEIPVIYGPPLAIALIEDKLEEAAVTGRTS
LKTVRSREIVRVGKHFLVEFIRNTHSMADSFTLAIHTPIGILIHTGDFKIDHTPIDGQHF
DFHRLAEYGEKGVLCLLSDSTNSEVPGHTPSEASVYPNLDRIFAQAQGRIMLTTFASSVH
RINIALQLSQKHNRKVAVVGRSMLNVIAHCRNLGYIKCPDELFVPIKATKGLADERVLIL
TTGSQGEPLAAMTRIANGEHPLVKTRPGDTIIFSANPIPGNTIAVVNCIDKLMMQGANVI
YGRDKGIHVSGHGCQEDQKMMLALTKPKFFVPVHGEHRMLVQHAQTAQKMGFTKENTVII
KNGDVIELSTERIQVVAQVPAGLELVDQAGIVHEQVMEERQQLANDGVVTVAATVNQQGK
LVTQPQLNLRGVVTVVDSALLHQLINRSIEQILSERWGEFKTQSGIPNWTGLRQEIESYL
QRLIKRELKSQPLVVFVLQWADTSESPLQPEQAQQAEQPEQAEQPEQAEQPEATTSGRTY
RRRRSTASMAS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaacgaaacccaatctaaattaaaaattattcccctaggcggacttcatgaa
atcggaaaaaatacttgtatctatgagtatgaagatgaaatattaatggtggatgcagga
atcgcttttcccaccgatgatatgcacggggttaatatcgtcttacccgaaatgacctat
ctacgagaaaatcatcagaaaataaaagggatgattgctactcatggtcatgaagatcat
attgggggaataccttaccatttaaaacaatttgaaattcccgttatttatggtccgcct
ctcgccattgccttaatagaggataaattagaagaagccgccgtgacaggccgcaccagc
ttaaaaacggttcgttctcgggaaatagtgcgagttggaaaacactttttagtagaattt
atccgtaatacccactcaatggccgatagttttacgctggccattcacactcctatcggc
atcctcatacacacaggagactttaaaattgaccatacccctatagatggtcaacatttt
gactttcatcgattagccgaatatggggagaaaggcgtattatgcttactgagtgactcc
accaactcagaagtccccggacatactccctcagaagccagcgtttatcctaatttagac
cggatatttgctcaggcccaggggcgaatcatgctcaccacctttgcttcatcggttcac
cgtatcaatatcgccctacagttatcccaaaaacacaaccgaaaagtggcggtagtcgga
aggtccatgcttaatgtcatcgctcattgtcgtaacttaggctatattaaatgtcctgat
gagctatttgttcccattaaagccaccaaaggattagcggatgagcgggttctcattctc
accaccggctcacaaggagaacccttagcggctatgactcgcattgccaacggagaacat
cccctggtgaaaactcgtccaggagataccattatcttctctgctaacccgatacccggc
aataccatagccgtcgttaactgtatcgataaactgatgatgcaaggagcaaacgttatc
tatggacgggataaagggattcatgtttccggtcatggatgtcaggaagaccaaaaaatg
atgttagctctcaccaaaccgaaattctttgtgcctgtacacggagaacatcggatgtta
gtgcaacacgctcaaaccgcgcaaaagatgggatttaccaaagaaaacaccgttattatt
aaaaacggcgatgtgattgagttaagcactgaacggatacaagttgtcgctcaagttccg
gcaggactggaactggtagaccaagccggcatcgttcatgaacaggtgatggaagaacgc
caacagttagccaacgacggagtagttactgtagcggctaccgtcaaccagcaaggaaaa
ctggtcactcaacctcagctaaatttaaggggagtggtaaccgttgtcgatagtgcctta
ctacaccaattaattaatcgttctattgagcaaattctcagtgaacgttggggagagttt
aaaacccaaagcggcatacccaactggactgggttaagacaagaaatagagagttattta
caacgactaattaaacgggaactcaaaagccaacccttagtagtttttgtcctgcaatgg
gcagatacatcagagtcgcccttgcaacctgaacaagctcaacaagctgaacaacctgaa
caagctgaacaacctgaacaagctgaacaacctgaagccacaacttctgggagaacttat
cggcggagacgttccactgcttcgatggcatcgtaa
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