Gloeothece verrucosa: Cyan7822_2213
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Entry
Cyan7822_2213 CDS
T01310
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cyj
Gloeothece verrucosa
Brite
KEGG Orthology (KO) [BR:
cyj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyj03021
]
Cyan7822_2213
Transcription machinery [BR:
cyj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cyan7822_2213
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GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Spectrin_Anc-1
HTH_25
Motif
Other DBs
NCBI-ProteinID:
ADN14192
UniProt:
E0UE67
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Position
2468806..2470062
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AA seq
418 aa
AA seq
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MTATIFSSKTDNEYAPSAYSLLNSYSKTKMAIEIDNDALLASDISETETVTASKTHTRAT
TDLVRLYLQDIGRVPLLKKDEEVQNAQDLQRYIQLLELRSVAIANGDLVIKNFVSLIEKR
DQLTSQLGHRPSLERLADAAEITVFELKKTLYEGKRHWAELANLEVQELERVQKAGIYAK
EQMIKANLRLVVSVAKRYQNRGLELLDLIQEGTLGLERAVDKFDPTKGYRFSTYAYWWIR
QGITRAIATQSRIIRLPVHITEKLNKIKKAQRKIAQLKGATPSIEELSQELEMSPPQIRE
VLMRVPRSVSLEIKVGKEKDTELIDLLETTEASPEDNIANEALRQDLHNLLADLTTRERE
VIQLRYGFKDGKSYSLADIGRTLQLSRERVRQIEAKAIQKLRQPKRRNQIRDYFEALS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaactattttttcgagcaagaccgacaacgagtatgctccatcagcttacagt
ttgttgaattcctattccaaaacaaaaatggctattgagatagataatgatgctctgctc
gcatccgatatttccgagacagagaccgtaaccgccagcaaaactcacactcgggcaaca
acagatttagtcagattatatctacaggacattggccgtgttcctttgctcaaaaaagat
gaagaagtccaaaatgctcaagatttacagcgttacatacaattattagaactccgttca
gttgccattgccaacggagatctcgtgattaaaaactttgtttctctcatcgagaaacga
gatcaattaacatctcaattaggccatcgtccttctttagaacgtttagcggatgctgct
gaaataacagtttttgaactcaagaaaactctttatgaaggaaaacgccattgggcagaa
ttagctaatcttgaggttcaagaattagagcgagttcaaaaagcgggaatttatgccaaa
gaacagatgattaaggcaaatttgcgcttagtggtttcagtagccaaacggtatcaaaat
cggggtttagaactcctagatttaattcaagaaggcactttaggattagaacgagccgtc
gataaatttgatcccactaaaggctatcgttttagtacctatgcctattggtggattcgt
caaggaattactcgggcgatcgctactcaaagtcgtattattcgtctaccggttcatatt
acagaaaaactcaataaaattaaaaaagcacaacggaaaattgctcaacttaaaggcgca
actccaagcatagaagagttatcccaagaattagagatgtcacctccgcaaattcgggaa
gtattgatgcgagtacctcgctctgtgtccttagaaattaaagtcggcaaagaaaaagat
actgaattaatagatttattagaaacaacagaagcctctccagaagataacatcgctaat
gaagcccttcgacaagatttacacaatcttttagcagatttaacgactcgagaaagagaa
gtcattcaactgcgttatgggtttaaagatggcaaatcctattccctcgctgatattggg
cgcactttacagctttcacgcgaacgagttcgacaaattgaagctaaagcgatccaaaaa
ttacgccaaccaaaacgccgtaatcagattcgagactattttgaagccttaagctaa
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