Gloeothece verrucosa: Cyan7822_2732
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Entry
Cyan7822_2732 CDS
T01310
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cyj
Gloeothece verrucosa
Pathway
cyj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cyan7822_2732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyj03019
]
Cyan7822_2732
03400 DNA repair and recombination proteins [BR:
cyj03400
]
Cyan7822_2732
Enzymes [BR:
cyj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cyan7822_2732
Messenger RNA biogenesis [BR:
cyj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Cyan7822_2732
DNA repair and recombination proteins [BR:
cyj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cyan7822_2732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADN14699
UniProt:
E0U5I6
LinkDB
All DBs
Position
3041008..3042459
Genome browser
AA seq
483 aa
AA seq
DB search
MNDLAADWNQVRATFKKIWGYEDFRPPQGEIIQTLLNAKDALIVMPTGGGKSICFQLPAL
LKSGLTLVISPLVALMENQVQELQQLNLSAALLHNEIPRSQRKKTLQALEKQQLKLLYLS
PETLLSTPIWERLSHPQVKINGIILDEAHCLVNWGDTFRPVYRRLGTVRPALLQSKPPGT
KIAIAAFTATANPQAQGIITEVLQLQTPETFLISPYRNNLNLRVKITVSPGCRRHQLLKF
IQSQGKQAGLVYVRSRKDSENLSEWLRTLNYSTAAYHAGLSSSERRYIETGWLNDDLQFV
VCTSAFGMGINKSNVRWVIHFQAPQLLSEYLQEVGRGGRDGKSTEALTLMSEPTGWLDPT
DQQQWRFFANKLAKQYQQAQQIANKIPAQGEIQTIAEALAAGDISLGLLHSLGQVEWLDP
FQYQLKFKNSSALNQSKNNSQQTQFEMKRYLNTKRCRWQFLLNAFGFIEEATGFKCGHCD
NCR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacctggccgccgattggaatcaagtccgagccacctttaaaaaaatttggggc
tatgaagatttccgcccccctcaaggagaaatcattcaaaccttattaaacgctaaagac
gcattaattgtcatgccaaccggcggaggaaaatcgatttgttttcaacttcccgcctta
cttaaaagcggcttaacgttagtcatttctccgttagttgccttaatggaaaatcaggta
caagaattacagcaacttaacttaagtgccgctttattacataatgaaattccgcgcagc
caacggaaaaaaaccttacaagcactcgaaaaacaacagcttaaattactctacctttct
ccagaaaccttacttagtacccccatctgggaaagattatctcatccccaagttaaaatt
aatggaattatcttagatgaggctcattgtttagtcaattggggagatacttttaggcca
gtctatcgtcgtttaggaaccgtaagaccggctttattacagtctaaacccccaggaaca
aaaatagcaattgctgcctttacggctacggcaaacccccaagcacaaggcattattacg
gaagttttgcaattacaaacccctgaaacttttttaattagtccctatagaaataattta
aatctgagagttaaaataactgtctctcctgggtgtcgtcgtcatcaactcttaaagttt
attcaaagtcaaggaaaacaagccggtttagtgtatgttcgttcccgtaaagacagtgaa
aacttaagcgaatggttacggacattaaattattcaacggcggcttatcatgccgggtta
agttcgtctgaaagacgctatattgagacaggatggttaaacgatgatctacaatttgtc
gtttgtacgagcgcgtttggcatggggataaataaaagtaatgttaggtgggtcattcat
ttccaagcgccgcaattattatcagaatatcttcaagaagtgggaagagggggaagagat
ggaaaatcaaccgaagcattaactttaatgagtgaacctacaggatggttagatcctact
gatcaacaacaatggcggttttttgcgaataaattagctaaacaatatcaacaagcacaa
caaattgctaacaaaatccctgcccaaggagagatacaaaccattgcagaagcattggcg
gcaggagatatctctctcggtttactccatagtttaggtcaagtggaatggttagaccct
tttcaatatcagctaaaatttaaaaattcttcggctttgaatcaatctaaaaataattct
caacaaacccaatttgaaatgaagcgatatttaaatacaaaaagatgtcggtggcaattt
ttacttaatgcttttgggtttattgaagaagcgacggggtttaaatgtggccattgtgat
aattgtcgttag
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