Gloeothece verrucosa: Cyan7822_3331
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Entry
Cyan7822_3331 CDS
T01310
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cyj
Gloeothece verrucosa
Pathway
cyj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cyan7822_3331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyj03019
]
Cyan7822_3331
03009 Ribosome biogenesis [BR:
cyj03009
]
Cyan7822_3331
Enzymes [BR:
cyj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Cyan7822_3331
Messenger RNA biogenesis [BR:
cyj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Cyan7822_3331
Ribosome biogenesis [BR:
cyj03009
]
Prokaryotic type
rRNA helicases
Cyan7822_3331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
CMS1
HEM4
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ADN15281
UniProt:
E0UCT7
LinkDB
All DBs
Position
3684607..3686055
Genome browser
AA seq
482 aa
AA seq
DB search
MTISFKNLGLSDARVQHLESIGFTNPTDIQQKAIPLLLEGHDVVGQSQTGTGKTAAYSLP
LLERIDRHSRSVQALILTPTRELAQQVAQAIKDFVDDRRLFILTVYGGQSIDRQIRSLER
GVQIVVGTPGRVIDLLERKKLSLDELQMAVLDEADEMLSMGFIDDVKKILQQTPSTRQTA
CFSATMPPEIKRLIDQFLKSPVVVSATQHEATPERIDQHIYMVPRGWSKLKALQPILEIE
DPESAIIFVRTKQTATELTGKLQESGHHVDEYHGNLSQAQRERLVQRFREGKIKLVVATD
IAARGLDVEDLSHVINFDLPDNTETYIHRIGRTGRAGKTGTAISLIEPIDRRMLRQIEHR
VGHRLDVSQLPDRSLVEAKRLSKLQTQVKETLAGERMASFLPLVRELSAEYDPLAIAAAA
LQMVYDQDCPNWMKTDWEVPKETAPKPMLKQQRRYNKSGKPSKFEKSGRHGDRKPVIQNQ
SR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttctttcaaaaacctaggattatctgatgcccgtgttcaacatttagaatca
atagggtttactaatccaacagatattcagcaaaaagccatccctcttttattagaaggt
cacgatgtggttggacaatctcaaaccgggacaggtaagacagccgcttattcgttaccg
ctattagaaagaattgatcgacattctcgatcagtgcaagcactaattttaacacccact
cgggagttagcacaacaagtagctcaggctattaaggattttgtggatgatcggcggctg
tttattctaaccgtttatgggggtcaatccattgatcgacaaatccgcagcttagaacga
ggcgttcaaatagtagtgggaacccccgggcgagtgatcgatctcttagaacgcaaaaaa
ttgagcttagatgaactgcaaatggcggtactcgatgaagccgatgaaatgttaagcatg
ggctttatcgacgatgtgaagaagattttacaacaaactcctagcactcgtcagacagcc
tgtttttccgccaccatgccgccagaaatcaagcgcttgatcgatcaattcttaaaatct
ccagtggtagtaagtgcaactcagcacgaagcaaccccagaaagaatcgatcagcacatt
tatatggttccccgaggctggtcaaaattaaaagccttacaaccgattttagaaatagaa
gaccccgagtcggcgattattttcgtcagaaccaaacaaaccgctaccgaactcaccggt
aagttacaagaatccggacatcatgtggatgaatatcatgggaacttgagtcaagcgcaa
cgggaacgcttagttcaacgtttccgcgaaggaaaaattaagttagtggtagccacagat
atcgcggcaagaggtttagatgtagaagatctctcccacgtgattaactttgatctaccg
gataacacagaaacctatattcaccgcataggacgcaccggacgcgcaggcaaaaccgga
accgctatttctttaattgaacccattgaccggcggatgttgcgccaaattgagcatcga
gtcggacatcgcttagatgtcagtcagctaccggaccgctctttagtagaagccaagcgg
ctttccaaactgcaaacccaagtgaaagaaaccttggccggcgaaaggatggcctcgttc
ttacccctagtacgggaattaagtgcagaatacgatcctttagccattgcggcggcggcc
ttgcaaatggtctatgaccaagattgtcctaactggatgaaaacagattgggaagtgcca
aaagaaacagcacccaaacctatgctcaaacagcaacgccggtacaataagtctggtaaa
ccgagtaagtttgaaaagtctggtcgtcacggcgatcgtaaaccggtaatacaaaatcag
tctcgttag
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