Gloeothece verrucosa: Cyan7822_4984
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Entry
Cyan7822_4984 CDS
T01310
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cyj
Gloeothece verrucosa
Pathway
cyj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cyan7822_4984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyj03400
]
Cyan7822_4984
Enzymes [BR:
cyj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Cyan7822_4984
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Cyan7822_4984
DNA repair and recombination proteins [BR:
cyj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cyan7822_4984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ADN16873
UniProt:
E0UIA5
LinkDB
All DBs
Position
complement(5423375..5424208)
Genome browser
AA seq
277 aa
AA seq
DB search
MPELPEVETVCRGLNQLTLGQPIEGGEVLLSRTLAYPFSIAEFWQGITGTSINRWQRRGK
YLLAQLDSGGGLGVHLRMTGQLLWVKRETPYPKHTRLRLFVGQDQELRFVDIRTFGKIWY
IPPNQAPETIMTGLQKLGVEPFSNEFSREYLQQKLKNSRRSIKSVLLDQEVVAGIGNIYA
DEALFKSGIKPNAIACSLTPEQLEKLRLAICDVLQTSIDKGGTTFSDFLSVTGVNGNYGG
VAWVYGRGGKSCRVCGTLIERVKLGGRSAHFCPKCQL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactgccagaagtagaaacggtttgccggggtctaaatcaattgaccctaggg
caacctatagagggtggggaagtgttactgtcaaggacacttgcttaccccttttctatt
gctgagttttggcaagggataacaggcacaagcataaaccgttggcaacgtcgaggtaag
tatcttttagcccaattagactcaggaggagggttaggggttcatctacggatgactggg
cagctattatgggtaaaacgagagactccctacccaaaacatacccgcttacgtctattt
gtcggacaagaccaagagttacggtttgttgacattaggacgtttggtaagatttggtat
ataccccctaaccaagcaccagaaaccattatgacagggttgcaaaaattaggggttgaa
ccctttagtaatgagttttctcgggagtatttacagcagaagttaaaaaacagtcgccgc
agtattaaaagtgttttgttagatcaggaagtggtggccggtattggcaatatttatgct
gatgaggcgttgtttaagagtggaattaaaccaaatgcgatcgcctgttctctaactcct
gaacagctagaaaaattacgtttagctatttgtgacgttttgcaaacatctattgacaaa
ggcggcacaacctttagtgattttttgagtgtgacaggagttaatgggaattatggggga
gtggcctgggtttatggtcgtggcggaaaatcttgtcgggtttgtgggacgttgatagaa
cgggttaagttaggggggcgttcggctcatttttgtcctaagtgtcaattataa
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