Gloeothece verrucosa: Cyan7822_5040
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Entry
Cyan7822_5040 CDS
T01310
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cyj
Gloeothece verrucosa
Pathway
cyj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cyj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cyan7822_5040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyj03021
]
Cyan7822_5040
03400 DNA repair and recombination proteins [BR:
cyj03400
]
Cyan7822_5040
Enzymes [BR:
cyj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cyan7822_5040
Transcription machinery [BR:
cyj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cyan7822_5040
DNA repair and recombination proteins [BR:
cyj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cyan7822_5040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ADN16927
UniProt:
E0UIF9
LinkDB
All DBs
Position
complement(5482622..5483566)
Genome browser
AA seq
314 aa
AA seq
DB search
MAQFQIECVELKAHKNQGQYGKFILEPLDRGQGTTVGNALRRVLLSNLEGAAVTALRIAG
VNHEFATISGVREDVMELILNMKEITLKSYTSQPQIGRLVATGPATVTAGQFDLPSEVEI
VDPSQYVATLAEGSKLEMEFRIEKGKGYRAIERGKDDSTSLDFLQIDSVFMPVTKVNYSV
EDVRVDGTSSKDRLTIEIWTNGSVNPKEALSEAAAIIVDLFSPLRDLNELEATQSDYPDE
VNPESQIPIEELQLSVRAYNCLKRAQINTVADLLDYSQEDLLEIKNFGQKSAEEVIEALQ
KRLGITLPQEKAKT
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttcaaattgagtgtgtagaattaaaggctcataaaaatcagggtcagtat
gggaaatttatcctagaacctctcgatcgcggtcaagggacaaccgtaggcaatgccctc
agacgagtattactctcaaacctagaaggagccgccgtaacagcgctccgaattgctggg
gtaaaccacgaatttgcgaccatctcgggggtgcgggaagatgtgatggagttgattttg
aacatgaaagaaatcactctcaaaagttatacctcacaaccccaaatcggccgtcttgtg
gcaaccggaccggcaacagtaaccgcaggccagtttgatttaccctcagaagtagaaatc
gtcgatcccagtcaatatgtggcgactctagctgaagggtcaaagctagaaatggaattt
cgcattgagaaaggaaaaggctaccgagctattgagcgaggaaaagacgatagcacatcc
ttagattttctccaaatcgattcggtgttcatgccggtaacaaaagttaattatagtgta
gaagatgtccgtgtagacggaaccagttctaaagaccggctaaccatagaaatttggact
aacggcagcgttaatcctaaagaggccttatcagaagcagcagcaattattgttgacttg
tttagtcctctgagagacctcaatgaactcgaagccactcaaagcgattacccagatgaa
gttaatcccgaaagccaaattcccatcgaggaactacagctatcggtacgagcttacaac
tgtctaaaacgggcacaaataaatacagtagcagatttgctcgattattctcaagaagat
ctcctagagatcaaaaatttcggtcaaaaatcagccgaagaagtgatcgaagctctgcaa
aaacgcctgggcattaccttaccccaggaaaaagcaaaaacctaa
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