Gloeothece verrucosa: Cyan7822_6866
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Entry
Cyan7822_6866 CDS
T01310
Name
(GenBank) Ribonuclease H
Organism
cyj
Gloeothece verrucosa
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RVT_3
Motif
Other DBs
NCBI-ProteinID:
ADN18512
UniProt:
E0UNI2
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All DBs
Position
Cy782203:complement(167583..174929)
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AA seq
2448 aa
AA seq
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MTLQIKHIDLISGEYIANPFQNQRREQPYWVEKLENTLLESFCPDIPLSVGHLDEFYIQS
NDPDKIALAENILKNHPEGHKLILANGDRFFYAPAEYEPIINEILGGLDVEKPDLKNRGA
YSSLLTSDQKSNTSRTATILIVDDETGENGGFLDEQDAWRLTGDCHGKMSPLFATDVFGA
MDRAIQFRIGLKEDKFIGKGTLTPRWLDEDEHEHFRTLKFTDPSNVPQIDLVLPLSSFKG
TAKGNIKPGLITTEIVITEKDRSKGKRERGSLISASQPVQYYTEALKDTTPLLKERLDEL
LASLKDPRLLEELYTQAQIGDEGDSELDSEQFQDLIAELIKNDEHGQLRETEFFKKKLEQ
FQSKQWTESAIGKFVKFNRAVVIPSKDLGLGELYWNNYKPDESIIGFRSPMIGKNGLRIS
TNIPVEEGLAPDGTPLVGVLVINDISWSRLHQQLNNELKEALTTHPDSQIQLQHILEQLP
TAQQLKDSSGRERVTLIDRINEKIQPFIDTGLELTPLPYETDNEADGMDFDGDTYGFELI
HNYPHLAQAARLHALNPDIPIKKEDKLSFDPNWSFERVALFMANSPVGVINNQVTTVQSF
KNELQSIKDYGKPQRQIEYAQKLAQSANKQISCESRKKNPRPIPEVYRQQIYEIAKIATE
PITVESAAKIFDLTEQIYDELLIEAQYNNQIAVDMFKSARAPSLDRIRQDKGALSRKLET
ITDKKQQGLYVGDRTLKATGVTPVELMAHLTNASYQSQSLESRPLHQFRAFFPDDFSEQQ
LLEVTEKKNEFDQLWNLAQTLRREKDSEPGPVLNFTTEKGERVRLTNIVPFDTISHFAPL
KEHLLNVSFKLNDDPYTQKTHQLLATTTINGETITLGTLKESDREKLRIKPNTTIKGTGK
LGQALSEDEIKLLFNQAFDGARAWKESLPTEQVGQYLAATAEMACKEVKDVPNPPNTTQN
FLFSTFAKEIAEQSKTFQLDEFLVEGLSQYNKVPPELLNSDVQLRVSPQTVTDKDKQRIR
RGWEVYNPTDEQWYSFGLSSEKGAQLPLGTTVKGTLTGNNPTTATLDLTTPSIRNKLKPF
LDGGGQIVFGQIDKYAAAGVVFNGENKTFTLRRFTPSVEYVVTLGDKTLGIVDPASWDKI
GKTNSHNATITTYGSQKGRYAIATTDNGDKIKINKIAFRGHDDFKEQSFVNHQVKLSIKT
SNSKEELGVETIIDGLPQIIGVIGNHRDQKPGRLALINSKLPLDGLTIEAAITSRLTLGL
VQIKPLTIQYPKTGEWVKTAQSLPDEQKPSLNKNAAYFLNQLSTHPTLLSSNEEKWLFPN
GKEVNLPTFKITVDIRKAGAVEKYLTDNKIPFAITSSSSEKKRSLISLAMVEGDLPPNIW
NNLEEKFGKVLNGDEYQQKLTEILPFSNKVRRIFRKREELKPYLKINPLSAITTGQPGKI
EQLSEDNKDMNQALNSNNEREAAEKELKDQSPNEPSADSNSPPTDDNINKEKPSLNLLAQ
VLISSDSKDPVLAALTNPTEAAHYKGNIKSHYPVSFRDNPQREAIGKNHHGLDNYKAEKY
FSDKAAGVPFISAEDAYKHYAKSLNSQSEKEALLTEIIAAKLTQYPKLTVEIHKRGGVEY
LERGVYQTIGNNKEWEGTGRENGFIRALIGGYEKAIALKETFFDERGQLKKPDNPGILVP
LGKNDSVEKNRIKDREMAAIATQFIGFPVDKTMDTSTKDYQAAWNLFDRANTGKYTSDDL
IMVSGNVPRNNKKEIITLEQIQSTFDDKYKPLLDKAIAAGSGFVVGDASGTDQLIQAYLT
EKGYLLKPNERGYMEAVLPLQQKAAIDEPSPALVDYIELMPILGANEQEKYRASLMDSVK
DYQGIVTQYYALHDYLQMKADKIFSIDPDLAPILEQQSILLQKFTSDESDIYPNFSKLFT
EDGKDFDPLRDKIDSLSKQLNENIKEEIKSYSEEALTDLKAAAFNFFKVPPQLDKVNDIY
EHILQQTAPEIQDYWKKKEVEPNIENNTVTVEATPTKKITLHTDGSSLGNLGPGGWAYVI
SDSEGQQLANNGAVPNTTNNRMELTAVIEGIKAVKENYKDISDIHIVSDSQYVLKSINGE
WQKKKNQDLWEQFDKISQNINLTTEWVKGHDGHEFNELCDGLAHSAANDLQKTQRQTESN
KDITVEAQRVTEPNKDTPDKLTEKVEVDVSSNGHKKPTYSDDEAVVISESPKITPSNVEK
ETPEITSTPEAVVQPLIPEVAPPTEVTAASPNKATEHQTLPTAEDLIDIHLDKQYMPENI
SIQQVRTSQVAPVLMALLKAKKMTDSPEYSYNPETNIAQFVGDKNTISFDGTYLKMTDNA
TGNERMVASRTQNDITGDMNWIAQPLPHKGEGLTETHVKRYNNPDTIALIKTVIFEAHQQ
QQREQLQVQNEPQEQLVYANSNGNGHVRRGEKVNTLFDLKTLIAFQQQ
NT seq
7347 nt
NT seq
+upstream
nt +downstream
nt
atgacgctacagatcaaacacatcgacttaatatccggcgaatacattgccaacccattc
caaaatcaacgccgtgaacaaccttattgggtagagaagcttgaaaatactttattagaa
tcattctgtcccgatatccccttaagtgtcggtcatttagacgaattttatatccaatct
aatgatccagataagatagcccttgctgaaaatattctcaagaatcatcccgaaggacac
aaacttatcttagcaaatggagatcgcttcttttatgcgccagccgaatatgaacctatt
atcaacgagattctgggaggattggatgtagaaaaacccgacctaaagaataggggtgct
tattcatcactgttaacatcagaccaaaaatctaatacatcacggactgctaccattcta
atagttgacgatgaaactggtgaaaacggaggctttttggatgagcaggatgcttggaga
ttgacgggtgattgtcatggaaaaatgtcacccctctttgccactgatgtatttggagca
atggatagagcgattcaatttagaatagggttgaaagaagataaatttattggtaaagga
actttaacccccagatggcttgatgaagatgaacatgaacatttccgaactctcaaattt
actgaccccagtaacgtacctcaaatagaccttgtgcttcccctgtcttcatttaaagga
acggccaagggaaatatcaaacctggtttaattaccacagaaattgtaattacagagaaa
gatcgttctaaaggaaagagagaaagaggctcactaatttcagcatcgcaacccgtacag
tattacaccgaagccctcaaagatactacacccttgcttaaagaacgtttagatgaactt
cttgcttctttaaaagatcctcgtcttcttgaagaattatatactcaagcccaaataggt
gatgaaggggactccgaacttgactccgaacaatttcaggatttaatagccgaattaatc
aaaaacgatgaacatggacaattaagggaaaccgagttttttaagaagaagttggaacaa
tttcaatccaaacagtggactgaatcagcaataggaaaatttgttaagtttaaccgggct
gttgttattccttctaaagacttaggactgggtgaactttattggaataattataagccc
gacgaatcaatcatagggtttcgctctcctatgattggtaaaaatggattgagaatatcg
acgaatattcccgtagaggaaggattagcccccgatggaactcctctagttggtgttctg
gtaatcaacgatatctcctggtccaggctgcatcaacaactaaacaatgaattgaaagag
gcgctcaccacccatcccgactctcaaatccaactccagcatattctcgaacagttaccc
actgcccaacaattaaaggattcatcgggaagggaaagagttacattaattgatagaatc
aatgaaaaaattcaaccttttatcgatactggtctagaattaaccccattaccctatgaa
accgacaatgaagcagacgggatggattttgacggggacacctacggctttgaactgata
cataattatccccatctagctcaagcagcaagacttcacgcactcaatccagatatcccg
attaaaaaggaagataaattatcattcgaccccaattggtcatttgaacgggtagcgtta
tttatggccaactcaccagtcggggtgatcaacaatcaggtgacgactgttcaatctttc
aaaaatgaactccagagtataaaggactacggcaaaccgcaaaggcagatagaatatgcc
caaaaactagctcagagcgccaataaacaaatctcctgcgagagtaggaaaaagaacccg
cgtcccattcccgaagtatatagacaacaaatttacgaaattgccaaaatcgccactgaa
ccgatcacggttgagagtgccgctaaaatatttgacctaactgagcaaatctatgatgaa
ttgctcattgaagcgcaatataacaatcagatagccgtcgatatgttcaagagcgctcgt
gccccctctctagatagaatacgacaggataaaggtgcattatcgagaaaactagaaacg
ataaccgacaagaaacagcaggggttgtatgtgggcgatcgcaccctgaaggcaaccggt
gtaacacccgtagagttgatggcgcatttaacaaatgcctcctaccaatctcaatccctt
gaaagccgtccgttacaccaatttcgtgctttctttccggatgacttcagtgagcaacag
ctattggaggtaacggagaagaaaaatgaattcgaccaactgtggaacttagcacaaacg
ttgaggagggagaaggattcagaaccgggtcccgtattaaactttactacagaaaaaggt
gaaagggttagactaaccaatatcgtccctttcgacacgatttcccattttgccccttta
aaagagcatctcttaaatgtatctttcaaactcaatgatgacccttatacccagaaaact
catcaattgctggcgacgacaactattaacggagaaactattaccctagggacgcttaaa
gagtcagatagggagaaattacgaattaaacccaatacgacaataaaaggtacaggtaaa
ctgggacaagcactatctgaagatgaaatcaaactcttatttaatcaagcctttgatggg
gctagggcatggaaggagtcattaccaactgagcaggtagggcaatacttggcagctacg
gcagagatggcctgtaaggaagttaaggatgtgcctaaccctcccaatacgactcagaat
ttcctattctccacctttgcaaaagagatagccgaacaaagtaaaaccttccaattggat
gagttcttagtggagggtttatctcaatacaataaagtgccccccgaattgttaaatagc
gatgtgcaattgagagtatctccccagactgtaaccgataaagataagcaacggatacgc
agaggatgggaagtctataacccaactgatgagcaatggtactcattcggattatcttcg
gaaaagggggcacagcttcccttggggacaactgtaaagggaacccttacgggaaacaac
ccgacgacggccacacttgatcttaccaccccatcaatacgaaataaactcaagcccttc
ctagatggaggaggacaaatagtcttcggacagattgacaagtatgccgcagccggcgtt
gtctttaacggtgagaataaaacctttaccctcagacgtttcactccttcggtcgagtac
gtcgtcacactgggcgataaaacgctcggtattgttgacccggcatcatgggataagata
ggcaaaacaaattcacataacgccaccattacgacttatgggagtcagaagggacgatac
gcgatcgccacgactgacaacggggataaaatcaaaatcaataaaatagccttcagggga
cacgatgactttaaggagcagtcattcgtcaaccaccaggttaaattaagcattaagaca
tctaatagtaaagaggaattaggggttgagacgataattgacggtttacctcaaattatc
ggagtaataggcaatcatcgggatcagaaacccggacgacttgcactcatcaatagcaaa
ctgcccctggatggattgacaattgaagccgccatcacatctcggttgaccctaggattg
gtacagatcaagcccttgactatacaatacccgaaaactggagaatgggttaagaccgca
caatcattgccggacgagcaaaaaccctcattaaataaaaatgctgcctatttcctcaac
caactgtccacacatcccacattattatcatcaaatgaggagaaatggctatttcccaat
ggaaaagaggttaatttaccaacgtttaagataaccgtcgatatccgtaaagcgggtgct
gttgagaaatatctaaccgataataaaattccttttgccattacttcatcatcatctgaa
aaaaagcgatcgctgatttccttagctatggttgaaggcgatttacccccaaatatttgg
aataatttagaggagaaatttggcaaggtattgaatggagatgaatatcaacagaaatta
actgagatactccccttcagtaacaaagttcgccgaatatttagaaagagggaagaactt
aagccctacctgaaaataaatccgttgtcggcgatcactacgggtcaacctgggaagatc
gagcaattaagtgaggataataaagatatgaatcaagctcttaactctaataatgaacga
gaagctgctgaaaaagaattaaaagatcaatcgccgaatgaaccttcggctgattctaat
tccccacccaccgatgataatataaataaagaaaaaccttctctcaatttactcgctcaa
gttctcatcagttctgactcaaaagaccccgttttggcggcattaactaacccgactgaa
gccgcacattataaaggcaacattaaatcccattaccccgtcagttttagggataatccc
caaagggaagccatcggtaagaatcatcacgggttagacaattataaagccgaaaaatac
ttcagtgacaaggcagccggcgttcccttcatatctgctgaggatgcttataaacactat
gctaaatccctcaatagccaatctgagaaagaggcattattgacagagataatagcggct
aaattgacgcagtatcccaaacttacggtagaaattcataaacggggtggggtggaatat
ctagaacgaggtgtctatcaaaccattgggaataataaggaatgggagggtacaggacgt
gaaaatggctttatacgcgcattgataggagggtatgaaaaagcgatcgcactcaaggaa
acctttttcgatgaacgaggacaattgaagaaaccggataacccaggcattttagtaccc
ctcgggaaaaatgattctgttgagaagaaccgaattaaagatagggagatggcggcaata
gccactcagtttataggcttccccgtcgataagacgatggatacatccacaaaagattat
caggcagcctggaatctatttgacagggcgaatacggggaaatatacatctgacgatctc
atcatggtatccggcaacgtaccgaggaataataaaaaggaaatcattaccctcgaacaa
atacaatcgacctttgacgacaaatataaaccattgttagataaagcaatcgctgcgggt
tcggggttcgttgttggtgatgcgtcaggtacggatcaactcatacaagcttatttaacc
gagaagggctaccttctcaagccgaatgaaagagggtacatggaagccgtcttaccttta
caacagaaagcggctattgatgaaccctcaccggcgttggtggattatatagagttaatg
ccgattttaggagctaacgaacaagagaaataccgggcatctttgatggatagtgttaaa
gattatcaaggtatcgtcactcaatattatgccctacacgattatttacaaatgaaggca
gataaaatattttcaattgacccagatttagccccaattcttgaacaacaatcaatctta
ctgcaaaaattcacatcggacgagtcggacatttatccgaatttttccaagctttttacc
gaagacggtaaagattttgacccccttagagataagatagattcgttatctaagcaatta
aatgagaatataaaagaggaaattaaaagctatagtgaagaagccttaaccgatttgaaa
gctgccgcttttaacttctttaaagttcctccccagttagataaggtcaacgatatctat
gaacatatcttacaacaaactgcaccggaaatacaggattattggaagaagaaagaggtt
gaaccgaatattgagaataatacggttacagttgaagccactcctactaaaaaaataact
cttcatacggatgggtcaagtttgggaaatctcggtcccggaggatgggcttatgttatc
tctgatagtgaaggtcaacaattagctaataatggcgcagttcccaatacgaccaataac
aggatggagttaaccgcagtcattgaagggattaaagcggttaaagagaactataaagat
atatcggatatccatattgtcagcgattcccagtatgttttaaagtcaataaatggagaa
tggcagaagaagaaaaatcaagatctatgggagcaatttgataaaattagccaaaacatt
aatctaaccacagaatgggttaagggtcatgatggtcatgaatttaatgaattatgcgac
gggttagctcatagtgcggctaatgatttacagaaaacccaacgtcaaacagagtcaaat
aaagatattacggttgaggcacagagggttactgaacctaacaaggacacaccagataag
ttaaccgaaaaagtagaggttgatgtctcatctaatggtcacaaaaagccaacctatagt
gatgatgaagctgtagtcatttcagaatcccccaaaattacaccatctaatgtggagaag
gagactccagaaattacatctacccctgaagctgttgtacaaccattaataccagaagta
gcaccgccaactgaggtaacagccgcatcacccaataaggcaacagaacatcaaacctta
cctacggcggaagatttgatagatattcatctagacaaacaatatatgcccgaaaacatt
tctattcaacaagtgagaacctctcaggttgcccccgtattgatggctttattaaaagcc
aagaaaatgaccgattcccccgaatactcctacaacccggaaaccaacattgctcaattc
gtgggggacaagaataccatttcctttgacgggacttatttgaagatgacagataacgca
accggtaatgaaaggatggttgcctcaagaacacaaaacgatattacgggagatatgaac
tggatagcgcaacccttaccccataagggtgaagggttaactgaaactcatgtgaaacgc
tacaacaacccagatactattgccctcattaaaactgttatctttgaagcccatcaacag
cagcagcgagagcaacttcaagttcagaatgaaccacaagaacaattagtatatgccaat
agtaacggaaatggtcatgtccgtaggggggagaaggtaaatactttatttgacttaaaa
acgttaatcgctttccaacaacaataa
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integrated database retrieval system
