Cyanobacterium sp. HL-69: AA637_01750
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Entry
AA637_01750 CDS
T05309
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cyl
Cyanobacterium sp. HL-69
Pathway
cyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA637_01750 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyl03019
]
AA637_01750 (deaD)
03009 Ribosome biogenesis [BR:
cyl03009
]
AA637_01750 (deaD)
Enzymes [BR:
cyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AA637_01750 (deaD)
Messenger RNA biogenesis [BR:
cyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AA637_01750 (deaD)
Ribosome biogenesis [BR:
cyl03009
]
Prokaryotic type
rRNA helicases
AA637_01750 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_19
Flavi_DEAD
HEM4
Motif
Other DBs
NCBI-ProteinID:
AUC59949
UniProt:
A0A2K8WLH0
LinkDB
All DBs
Position
complement(373319..374770)
Genome browser
AA seq
483 aa
AA seq
DB search
MTTSFASLGLSETLVNQLENIGFDTPTKIQTLAIPELIAGRDVVGQSQTGTGKTAAYSLP
ILDRIDKSDKSVQALILAPTRELAQQVAEAFKDLIGREKIFVTTVYGGQSMERQIRFLEK
GSHIVVGTPGRIIDLLNRKHLKLDNLRYVVLDEADEMLSMGFIDDVKTILSRTPDSRQTT
CFSATMPKEIQLLVKEFMTDAVNVTGEKPQDTPSRIEQVVYMVPRGWSKIKTIQPILEIE
DPQSAIIFVRTKRTASELTSKLQEAGQSVDEYHGDLSQQQRERLIQRWRDGKIKVVVATD
IAARGLDVSDLTHVFNFDLPDNTETYIHRIGRTGRAGKEGKAIALVEPSDRRLLRQIERR
LKQTITVEVVPNRSTVEAKRMVKLKEQIKESLSGERLASFLPMVKELNGEYDSSAIAAAV
LQILYDQNCPAWLQQDWEVPPPATPKPNVGGKKYGRGGGKYNRGKSSYGGGKPSRKYDRP
QVR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttctttcgcaagtttaggactttcagaaactctcgttaaccaattagaaaat
attggttttgatactcctactaaaattcaaactctcgcaatccctgaattaattgcaggt
cgtgatgttgtgggacaatcgcaaactggtacgggtaaaaccgccgcttattctctccct
attttggacagaattgataaaagcgataaaagtgtacaggcactaattctcgcacctact
agggaattagctcagcaggtagcagaagcctttaaggatttaattggcagagagaaaatc
tttgttaccactgtctatggtggtcaatctatggagcgtcaaattcgctttttagaaaag
ggatctcacattgtggtgggtactcccggacgtattattgatttactcaatcgtaaacac
cttaagctcgataatttacgctatgtcgtattagacgaagccgatgagatgttgagtatg
ggctttattgatgatgttaaaaccattctctcccgtacccctgattctcgtcaaaccact
tgtttctcggctactatgcccaaagagattcaactgttagtaaaagagtttatgacagat
gcggttaatgtaactggggaaaaacctcaggatactccttctcgcatcgaacaagtagtt
tatatggtgcctcgtggttggtcaaaaatcaagaccattcaacctattttggaaattgaa
gatccccaatcggcgatcatctttgtgcgcaccaaacgtactgcctccgagttaacttct
aagttacaagaagcggggcaaagtgtggatgaataccatggtgatttgagccaacaacaa
agggaacgtttgattcagcgttggcgcgatggaaaaattaaggtagtggtagcaacggat
attgctgcccgtggtttggatgtgtcggatttaacccacgttttcaactttgatttacct
gataacaccgagacttatattcaccgtatcgggcgtacgggaagggctggtaaggaaggt
aaagctattgctttggtggaacctagcgatcgccgcttattacgtcaaattgagcgtcgt
ttaaaacaaactatcactgtggaagttgtgcctaaccgctccaccgtagaagcaaaaagg
atggttaagctcaaggagcaaatcaaagaatccctcagtggagagcgtttggcttccttc
cttcctatggttaaggaactaaatggagaatacgactccagtgcgatcgcggcagcagtc
ttacagattctttacgatcaaaactgccccgcatggttacaacaagattgggaagtacca
cccccagctactcctaaacccaacgtcggcggtaaaaaatacggccgtggcggtggtaaa
tataaccgtggcaaatccagttatggcggtggaaaacctagtcgtaaatacgatcgcccc
caagtaagataa
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