Cyanobacterium sp. HL-69: AA637_13750
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Entry
AA637_13750 CDS
T05309
Symbol
rpoC2
Name
(GenBank) DNA-directed RNA polymerase gamma subunit RpoC2
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cyl
Cyanobacterium sp. HL-69
Pathway
cyl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cyl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AA637_13750 (rpoC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyl03021
]
AA637_13750 (rpoC2)
03400 DNA repair and recombination proteins [BR:
cyl03400
]
AA637_13750 (rpoC2)
Enzymes [BR:
cyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AA637_13750 (rpoC2)
Transcription machinery [BR:
cyl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AA637_13750 (rpoC2)
DNA repair and recombination proteins [BR:
cyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AA637_13750 (rpoC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
AUC62144
LinkDB
All DBs
Position
2830011..2831897
Genome browser
AA seq
628 aa
AA seq
DB search
MTKQQTRQFDYVKIGIASPERIREWGERTLPNGIVVGEVTTPETINYRTLKPEMDGLFCE
KIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYLKLAAPVTHVWYLKG
IPSYLSILLDMPLRDVEQVVYFNSYVVLNPGNASNLSNRQLLSEDQWMEIEEQIYAEDSE
LEDIEVGIGAEAVERLLQEIQLEEEADKLREDISNSKGQKRAKLIKRLRLIDNFIATGSK
PEWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLQEILAPEIIIR
NEKRMLQEAVDALIDNGRRGRTVVGGNNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPSLQIYQCGLPREMAIELFQPFVINRLIRIGIVSNIKAAKKMIIKGDPSIWKVLE
EVITGHPVLLNRAPTLHRLGIQAFEPVLVEGRAIQLHPLVCPPFNADFDGDQMAVHVPLS
IEAQAEARLLMMACHNILSPATGKPIIAPSQDMVLGCYYLTAENPAATKGADSYYANLED
AFKAYEQGLIDLHAYVWVRFDGEVDGSRPDDTPEKIEELTDGSVWKYYGDRKVRETAEGE
KIAQYVHTTPGRIIYNKTIIDALDFEAV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcaacaaacaagacagtttgactacgttaaaatcggcatcgcctcccccgaa
agaattagagaatggggcgagcgcaccttacccaatggtattgtagtcggtgaagtaaca
accccagaaaccatcaactatcgtaccctcaagcccgaaatggacggcttattttgtgag
aaaatttttggtccttccaaggattgggaatgtcattgtggaaaatataagagagtacgc
catcgtggcattgtgtgcgaacgttgtggggttgaagttacagagtctagggtgcgccgt
catcgtatgggctacctcaaactagccgcccctgttacccacgtatggtacttaaaagga
attcctagttatctaagtattctccttgatatgccccttcgggacgtagaacaagtagta
tatttcaactcctacgtggtgctaaaccccggtaatgccagtaacttgagtaaccgtcaa
ttgctcagtgaagatcaatggatggaaattgaggagcaaatttatgccgaggattcagaa
ttagaagatattgaagtaggtattggcgccgaggcggtagagcgtttattacaagaaatt
caactagaagaagaagcagataaattaagggaagatataagcaacagtaaaggacaaaaa
agagcgaaattaatcaaaagattacgcttaattgataactttattgccacaggttcaaaa
cctgaatggatggttttaagtgtaattcctgtcattccccctgatttgcgccccatggtg
caattagatggtggtcgttttgctacctctgaccttaacgatttataccgtcgtgtaatt
aaccgtaataatcgtttaaaacgtcttcaagaaattcttgcccctgaaattattatccgt
aacgaaaaacggatgttacaagaagcggtggatgctcttattgataacggacgtagaggg
cgtactgtggtaggtggtaataatcgtcccctcaaatccctttctgatattatcgaaggg
aagcaaggtcgtttccgtcaaaacctcttgggtaaacgggtggactactctggacgttcg
gtaattgtagtcggtcctagtttacagatttatcagtgcggtttgcctagggaaatggcg
atcgaacttttccaaccctttgtcattaaccgtctcatccgtatcggtattgttagcaat
atcaaggcggctaagaaaatgattatcaaaggtgatcctagtatctggaaagtattagag
gaagttatcacaggacaccctgtactactaaaccgtgcgccgactcttcaccgtttgggt
atccaagcctttgagcctgtgttggtagagggtagagctattcaactccatcctcttgtg
tgtcctcctttcaacgctgactttgacggggaccaaatggcggtacacgtacccctgtcc
attgaagcccaagcggaggctcgtttgttgatgatggcttgtcacaacattctttctcct
gctacgggtaaacctattatcgctccttctcaggatatggtattgggttgttattaccta
acagcagaaaatcctgctgccactaagggcgctgatagttattatgctaaccttgaggat
gcttttaaagcctatgagcaaggtttaattgatttacacgcctatgtatgggtgcgtttt
gatggggaggttgatggtagtcgccctgatgataccccagaaaaaattgaagaacttacc
gatggtagtgtttggaagtattatggcgatcgcaaagtgcgcgaaaccgctgagggtgaa
aaaattgcccaatatgtccacaccactcccggacgcattatttataacaaaaccatcatt
gacgctttagattttgaagctgtttaa
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