Cyanothece sp. PCC 7425: Cyan7425_3541
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Entry
Cyan7425_3541 CDS
T00836
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cyn
Cyanothece sp. PCC 7425
Brite
KEGG Orthology (KO) [BR:
cyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyn03400
]
Cyan7425_3541
DNA repair and recombination proteins [BR:
cyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cyan7425_3541
Archaeal homologous recombinant proteins
Cyan7425_3541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_15
Rad50_zn_hook
AAA_21
AAA_29
ATG16
ABC_tran
ULD
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ACL45862
UniProt:
B8HRJ5
LinkDB
All DBs
Position
complement(3488396..3491407)
Genome browser
AA seq
1003 aa
AA seq
DB search
MIPLRLTLKNFLSYREATLDFSGLHVACICGANGAGKSSLLEAIAWAIWGESRAGSEDDL
IHLGTKEAQVDFIFTLRQQTYRIIRSRHRGQSNLEFQVAIPEGFRSLTERGLRATQDLIC
QHLRLDYETFVNSAYLRQGRADEFMLKRPTERKQLLAELLKLDQYDLLSERAKDWARQLK
GQTILLENSLAEIEQQLQQRQTIDRQQQHLETELHQLRQQQESRQQQLQTLQTSQQQIVL
WQQQLTWHRQQQQNLHTEVERLQQQYTTACQQANTLFNLLQQQEQILAGYTRWHQLQEQE
ESLSAKFQLYQATQAQRQQLQHQQAEQLRALKHQHQQLETQKTLIEQHQQELQQTLSRSD
QVTTALEELQRARVQLHRLDQLQTQAFPLLQRQRELQLHLDRAHSRLSARLDELRASTAQ
LQTQQARQPQLQQAVLETTEQLTYLEKRRIYQQHVREKGLERRHFMERLQAQQREYEVQL
AQLEQKMQLLTQPDAHCPLCDSPLDQHHWSLVRQRHEQQQQEIFDQIWVVREQLAVSERE
IQVLRQEYRQLEQELSQWNTVLERRGHLQAQLQTTDSLAQRLEQVTAEVTGLERSLQNRD
FATELETDLQQIQTALEELNYDEKNHAIARGQVEYWRWAEVKQAELQQARKRQAQLAQQL
PALEEQITILQTQIEQQQNSELQRQIEHLEQTLASLDYNLEYHHELRQTLRQQQIWTLRH
QELLRAQQNYPQVQQSVQTLHQSLQLRQQELGAIGEQMTNLTRQLAQTHDHSQRIRELET
QLQADQQQREQKLSELGRLQQLSHQLTLLEQQSQQQRQQLARAGQQLRIYQELAQAFGKN
GIQALMIENILPQLEVETNQLLARLSGSQLHVQFFTQKAGRSNKPSGKLIDTLDILISDL
RGTRPYETYSGGEAFRVNFAIRLALARLLAQCSGNDLQMLIIDEGFGTQDAEGCERLIAA
INAIAPDFACILTVTHMPSLREAFQTRIEVQKTEEGSQLNLLV
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgattccgttgcggttaactctgaaaaatttcctcagctatcgggaggctaccttagat
ttcagtggattgcacgtcgcctgcatttgtggtgcaaatggagcaggtaaatcgtccctg
ctggaagcgatcgcctgggccatttggggggaaagccgggccggttcggaggatgatctg
atccatctgggcacaaaagaagctcaggttgattttattttcacattgcgacaacaaacc
tatcggattattcgcagccgccatcggggacagagcaatttagaatttcaggtcgctata
ccagagggatttcgtagtttaacggagcggggattgcgggctacccaggacttaatttgc
caacacctgcgcctggattacgaaacttttgtcaactctgcctatttgcgtcagggccgg
gctgacgaattcatgctcaagcggccgacggagcgcaaacaattactggcagaattgctc
aagctggatcaatacgatctgctgtcagaacgggcgaaggattgggcccgacaattaaaa
ggtcagacgattctgttggaaaacagcctggcggaaatcgagcaacaattgcagcaacgc
cagaccatcgatcggcaacagcaacatctggaaacagaactgcaccaactccgtcagcaa
caagaaagtcgtcagcagcagttgcaaaccctccagaccagccagcagcaaattgtactc
tggcagcaacaactcacctggcatcgccagcaacagcagaatctgcacacagaggtagag
cgcctgcaacagcaatacaccactgcctgccagcaggccaacaccctctttaacctattg
caacaacaggaacaaattctggccggatacacccgttggcaccaactacaggaacaggaa
gaaagcctgtcggccaaatttcagctttatcaggccacccaggcacaacggcaacaactg
caacaccagcaggcggagcaactccgggccctcaaacaccaacaccagcagttagaaacg
cagaaaacgctgatcgagcaacatcagcaggagctacagcaaaccttgagtcggagtgat
caggtcaccactgccctggaagaactccaacgggcccgagtccaactccatcgtctcgat
caactgcaaactcaggcgttccccctactccagcgccaacgggaactgcaactgcacctc
gatcgggcccactctcgcctcagtgcccgtttagatgaactgcgcgcctctactgcccaa
ctgcaaacccaacaggcccgccaacctcagttgcaacaagcggtgctggaaaccacagaa
caactcacgtatctggaaaaacggcggatttatcagcagcatgtgcgggaaaaagggtta
gaacgccgccactttatggaacgtttacaggcgcagcagcgggaatatgaagtgcaactg
gcccagctcgagcaaaaaatgcagttgttgacccagcccgatgcccattgccccctttgt
gattcccccctggatcaacaccactggtctttagtgcgtcaacgccatgaacaacagcag
caggaaatttttgatcagatctgggtggtgcgggaacaactggccgtatcggaacgggaa
attcaagtgctgcggcaggaatatcgccaactcgagcaggaattaagccagtggaatacg
gtattggagcggcggggacatttgcaggcgcaattgcaaaccacggatagcctggctcag
cgcttagagcaagtgactgctgaagtgacgggcctggagcgatcgttacaaaatcgagac
tttgccaccgagctggaaacagacctgcagcaaattcagaccgctctggaagaactgaac
tacgacgaaaaaaaccatgcgatcgcccggggacaggtggaatattggcgatgggcagaa
gtgaaacaggcggaattgcagcaggcccgcaaacgtcaggcccagcttgcccaacaattg
cctgccctggaggagcaaatcacgatcctgcagacacagatcgaacagcagcagaattcc
gagctacagcggcagatcgagcacctggagcaaacgttagccagtctggactataacctg
gaataccaccacgaactgcgccagacccttcgccagcaacagatctggaccttacgccat
caggaattgttgcgggcccagcagaactaccctcaggtgcaacagtcggtgcagaccctc
caccagagtttacagctgcgtcaacaggaactgggagcgatcggtgagcagatgaccaac
ctgacccgacaactggcccaaacccacgaccacagccagcggatccgggaactggagacc
caacttcaggctgaccagcagcaacgggagcaaaaattgtccgaactgggacgtttgcaa
caattgagccaccaactcaccctgctggaacagcaatctcaacagcaacggcaacaattg
gccagggcagggcaacaattgcgaatttatcaggagctggcccaggcttttggcaaaaat
ggcattcaagccctgatgatcgaaaatattctgccccaactggaagtggaaacgaatcag
cttttagcccggctgagcggcagtcaattgcacgtccagtttttcacccagaaagcgggt
cgcagcaataaaccaagtggcaaattgatcgataccctggatattctcatttccgatctg
cggggaactcgcccctatgagacttactctggtggagaagcgtttcgggtgaattttgcc
atccgtctggccctggcccgcctgttggctcagtgttctggcaacgatctgcaaatgttg
atcattgatgagggctttggcacccaggatgcggaaggatgtgaacgtctcattgctgcc
attaatgcgatcgcccccgactttgcctgtattctcaccgtcacccacatgccctctctc
cgagaagcctttcaaacccgaatcgaggtgcagaagacggaggaagggtcgcaactcaat
ctgctggtatag
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