Cyanothece sp. PCC 7425: Cyan7425_4141
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Entry
Cyan7425_4141 CDS
T00836
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cyn
Cyanothece sp. PCC 7425
Pathway
cyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cyan7425_4141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyn03019
]
Cyan7425_4141
03400 DNA repair and recombination proteins [BR:
cyn03400
]
Cyan7425_4141
Enzymes [BR:
cyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cyan7425_4141
Messenger RNA biogenesis [BR:
cyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Cyan7425_4141
DNA repair and recombination proteins [BR:
cyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cyan7425_4141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
pXO2-34
DUF7529
Motif
Other DBs
NCBI-ProteinID:
ACL46455
UniProt:
B8HWM9
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All DBs
Position
complement(4197715..4198995)
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AA seq
426 aa
AA seq
DB search
MPAILQMGLTLVISPLVALMEDQVEDLRQRQLPAAALHSDIPPRERQGILRSIERQQLRL
LYLSPESLFNAALWTLLCQPQIRITGMVLDEAHCLAQWGETFRPTYRRLGTVRPALLKQK
PPGTRMAIAAFTATADPPTQRLICSVLHLQQPKVFRYSPYRPNLELRVQTVWSPGHRRHQ
LFNFIKSQSNQAGLVYARTRRDCETLVETLREEGYRTAAYHAGLAASQRRQLEADWISGN
LPFVVCTNAFGMGINKPNCRWVTHFQAPFTLPEYIQEVGRGGRDGQRAIALTLVSEPTGW
LDSEDQQRRKYLQNQLQTQQQEAWQLVAKLPQEGDIHTLTRAHPQGAIALALLHSLGYLT
WRDPFNYVIHTGVKTAGGFPMPTSAADPMVQYFYTKTCRWQFLLQAFGFSQEAKNFRCGY
CNTCQK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgccatcctgcaaatggggctgactctggtgatttctcccctggtggccctgatg
gaagatcaggtggaggatctgcgtcaacgtcagttacccgccgctgcgttacacagtgat
attccccccagggaacggcaagggattttacgttcgatcgaacgccagcagttgcgctta
ctttatctctcccccgaatccctgttcaatgctgccctgtggacgctcctctgccaaccc
cagatccgcattacgggcatggttttggatgaagcccactgcttagcccaatggggagag
acttttcgtcccacctatcgtcggcttggcacggttcgtcccgctctgctcaaacagaaa
ccccctggcacccggatggcgatcgctgcctttacagctacggctgatccccccacccaa
cgcctgatctgttctgttttgcacttgcaacaaccgaaagtgtttcgctacagtccctac
cggcccaatctggaattacgggtgcaaacggtctggtctccggggcatcgccgccatcag
ttgtttaactttatcaagtcgcaatccaatcaagctggcctggtctatgctcggacgcgg
cgggattgtgaaaccctggtggaaactttaagggaggaaggatatcggacggcggcctat
cacgctgggttagcggcttcacaacggcggcaattagaagcggattggatcagcggtaat
ctgccctttgtggtttgtaccaatgcctttgggatggggataaataaaccaaattgtcgc
tgggtcacgcactttcaggctccttttacgttgccagaatacatccaggaagtgggacgg
gggggacgggatgggcaaagggcgatcgccctaacgctggtgagtgaaccaacaggctgg
ctggatagtgaggatcagcaacggcgaaagtatctgcaaaatcaattgcaaacgcagcaa
caggaagcctggcaattggttgcaaaattacctcaagaaggcgatattcatacccttacc
cgtgcacatccccagggggcgatcgccttggctttgctccacagtctaggctacctgacc
tggcgcgacccctttaactatgtcattcacacaggggtaaaaacggctgggggttttccc
atgcctacctctgcggctgacccaatggtgcaatatttctatacaaaaacctgtcgctgg
caatttctgttacaggcctttggatttagtcaggaagctaaaaatttccgttgcggttac
tgcaatacctgccaaaagtag
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