Citrobacter youngae: CD187_00245
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Entry
CD187_00245 CDS
T05526
Name
(GenBank) transcriptional regulator
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
cyo
Citrobacter youngae
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cyo03000
]
CD187_00245
Transcription factors [BR:
cyo03000
]
Prokaryotic type
Helix-turn-helix
Other families
CD187_00245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
AAA_22
AAA
Mg_chelatase
NACHT
AAA_16
AAA_14
AAA_2
HTH_Crp_2
IstB_IS21
AAA_25
AAA_24
TrmB
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AWV24777
LinkDB
All DBs
Position
48138..50936
Genome browser
AA seq
932 aa
AA seq
DB search
MRRIEIILGELERLTRGLNLAHLAQETAFTAEAIGFNLGLARNSVSKDLNQLWNDGLAIK
SRGRPVFFLHRQAIETLLGRKLDESEREVQTVADLLPVQENQATDDPFSSLIGYDRSLRD
AVEKGRAAVLYPHGLHVLLTGPSGVGKTFFAELMHRFACERAPGTPPPLVYFNCAEYAHN
PELLSSHLFGHRQGAFTGANENKPGLVEQADGGYLLLDEVHRLPYEGQEKLFSILDKGEY
RPLGSSAVARSISVRLICATTEPVSSALLRTFQRRIQVCIDLPGIRQRSVEEQVELIVGF
LQRESRKIERTISIDRTLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMTEHSDTLQLD
KRLTEIPFNATPEQRLLVGALFEGKEHLSIDARTLPALKNSLATGAEIEESDLFYSFLTR
EYINLRNSNVPPAETLAILKNKLSSIFEYGLYSRDSVAHPPRYGDQIEERVTLLIGCVEQ
VLGFTLPENLVNPLRKHFLALIGYVQRGLIPQLYSSSLILDRCKDEYENATLLCRKINEL
LHIQCPATEVVWLCLFLKECRHYRQRIDASPDCGVILIAHGATTATSQAQYVNRVLEREV
FSAIDMPFEQSVHDTLEALTQMIQTRQYRRLILMVDIGSLVHFGSTISKLFQIDVLLMPN
ITLTSLLEIGLDLSYETSDLPQLAALMQSKNIPCQLCTPQQENSGKVLVISCITGMGTAE
KIKKVLEESFGELMSQDTRMVILDYNEVRSLERVQQAINASERLAGIVGTFQPGLPDIPF
ISLEELFSEQGPELVLSLLTPDLSSSERRLEMERSAMRFISALTMESIINHISVLNPQRI
LKEMEGVLNHLTAALSLKPSRQVTLRFLIHCCCMVERIVINRKPLQMALENKPDLDVRAF
SVIKSAFLPIEEAYAIRLSDAEYFYIYELLYS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagacggattgagataatactgggagagctggaacggctgacgcgaggactgaatctt
gcccatctggcgcaggaaacggcgttcacggcggaggccatcggcttcaacctcgggctg
gcgcgcaactcggtcagtaaagatctcaatcagctctggaacgacggcctggcgattaaa
agccgcgggcgcccggtattctttctgcatcgtcaggcgattgaaacgctgctggggcgc
aaactggatgagtccgagcgagaagtgcaaaccgttgccgacctgttgcctgttcaggaa
aaccaggcgacagacgatcccttttccagcctgattggttacgatcgcagcctgcgcgat
gcggtggaaaaaggccgcgcggcggtgctgtatccccacgggctacatgttctgctgacc
ggtccctccggcgtgggtaaaaccttttttgccgaactgatgcaccgtttcgcctgcgaa
cgtgcaccgggaacacctccaccgctggtctatttcaactgcgcggaatacgcgcataac
ccggagctgctctcatcgcacctgtttggtcatcgacagggagcgtttaccggtgcaaac
gagaataaacccggtctggtcgaacaggctgatggcggctatctcctgctcgatgaagtg
catcgtctgccgtatgaaggtcaggaaaagctattctctattctcgacaaaggtgaatac
cggccgctgggttccagcgccgtggcgcgttcaatctcggttcgcctgatatgtgcgacc
accgaaccggtaagttcggcgttgctgcgcactttccagcgacgtattcaggtatgtatc
gatctccccggcattcgccagcgttcggtggaagagcaggttgagctgatcgttggtttc
ttacagcgtgagagccgcaaaatcgagcgtacgataagcatcgaccgtaccctgctgctc
tggctgctgaacaagccgctggaaggcaatattggtcagctcaagagcgatattcagttt
ctctgcgcccaggcctgggcctcgggaatgacggagcacagcgatacgctacagctggat
aaacgtctgaccgagatcccctttaatgccacaccggaacaacgtctgttggttggagcg
ctgttcgaaggcaaagagcacctgagcatcgatgcccgcacgttgccggcactgaaaaat
tcgctggccaccggagctgaaattgaagagagcgatctcttttacagcttcctgacccgg
gaatatatcaacctgcgtaacagcaacgtaccacctgctgaaacgctggcaatcctcaaa
aacaaactcagctcgatttttgaatatggtctctacagccgcgacagtgtggcgcatccc
ccgcgctatggcgatcagattgaagagcgagttacgctgctgatcggctgcgttgagcag
gtgcttggttttacgctgccggaaaatctggttaacccgctgcgcaaacactttctggcg
ctgattggctacgtgcagcgcggccttattccgcaactttattcttccagcctgatcctc
gatcgctgcaaagatgaatacgaaaacgccacgctgttatgccgaaaaatcaatgaactg
ctgcatattcagtgtccggcgacggaggtggtctggctgtgcctgttcctcaaagagtgt
cgccattaccgccaacggattgacgccagtcctgactgcggggtgattttgattgcccac
ggcgcgacgaccgccacaagccaggcgcagtacgtgaatcgcgtgctggagcgcgaggtg
ttcagcgctatcgatatgcctttcgagcagtcggtgcatgacacgctggaagccctgaca
cagatgatccagacccgacaatatcgccgattgatcctgatggtagatattggctcgctg
gtccattttggcagtacgatcagcaaattattccagatagacgttctgctgatgcccaac
atcacgctcaccagtctgctggaaatagggttggatttaagctacgaaaccagcgacttg
ccgcaactggcggcgttgatgcagagcaaaaatattccctgtcagctctgtacgccacag
caggaaaacagcggtaaagtgctggtcatttcgtgcatcaccgggatgggaacagcagaa
aaaatcaaaaaggtgctggaagagagcttcggtgagttgatgtcgcaggatacacggatg
gtgatcctcgattacaacgaagttcgcagcctggagcgtgttcagcaggcgattaacgcc
agtgaacgtctggcgggcatagtgggtactttccagccaggactgccggatattccgttt
atctcgctcgaggagttgttctctgagcaaggccctgagctggtgctcagcctgctgacg
ccagatctctccagcagcgaacgccgactggagatggagcgtagcgcgatgcgctttatc
agcgcgttgactatggagagcatcattaaccatatttcggtgctcaacccgcagcgtatt
ctgaaagagatggaaggcgtgctgaatcatctgaccgctgcgctgtcgctcaaaccgagc
cgtcaggtgacactgcgcttcctgatccattgctgctgtatggtcgagcgtatcgtgatt
aaccgcaaaccgttacagatggcgctggagaacaagccggatctggatgttcgtgcgttt
agtgtcattaaatctgctttcctgccgatcgaagaggcctatgccattcgcttatcggac
gcggaatatttttatatctacgaactgctgtatagctaa
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