Citrobacter youngae: CD187_00530
Help
Entry
CD187_00530 CDS
T05526
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cyo
Citrobacter youngae
Pathway
cyo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CD187_00530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyo03400
]
CD187_00530
Enzymes [BR:
cyo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CD187_00530
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CD187_00530
DNA repair and recombination proteins [BR:
cyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CD187_00530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-dskA_traR
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AWV24828
LinkDB
All DBs
Position
102939..103748
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGATIMHATVRNGRLRWPVSEEIYRLSDQPVLSVQRRAKYLL
LELADGWIIIHLGMSGSLRILPEELPADKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
DGHNVLAHLGPEPLSDDFNANYLQQKCSKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSKDECELLVRVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRE
GEPCRACGAPIVATKHAQRTTFYCRRCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtcgaaaccagccgccgtggtattgagccgcatttggtgggg
gcaacgattatgcacgcgacggtgcgtaacggtcgtttgcgttggccagtatctgaggaa
atctatcgtctgagtgatcaacctgtcctcagcgtacagcggcgcgcgaaatacctgctg
ctagaactggcggatggctggataatcattcatctggggatgtcgggtagcttgcgtatc
cttcctgaagagcttccggcagacaagcacgaccacgttgacttagtgatgagcaacggc
aaagttctgcgttataccgatccccgccgctttggcgcctggctgtggactaaagaactg
gatggacataatgtcctcgctcatcttggccctgagccgctgagcgacgatttcaacgcc
aattatctacagcagaaatgttcgaagaagaaaacggcgattaaaccctggctgatggat
aacaagctggtggtgggggtgggtaatatctacgccagcgagtcgctatttgcggctggg
attcatcctgaccgtcttgcgtcatcgctgtcgaaagatgagtgtgaattgctggtacgc
gttatcaaggcggtgttgctgcgttctatcgagcagggtgggacgacgctgaaggacttt
ctgcaaagtgacggtaagcctggctattttgcccaggagctgcaggtctatgggagagaa
ggtgaaccttgccgcgcatgtggcgcaccgattgttgcgacaaaacacgcccagcgtaca
acgttctattgtcgtcgctgtcagaaatag
DBGET
integrated database retrieval system
