Citrobacter youngae: CD187_01020
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Entry
CD187_01020 CDS
T05526
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
cyo
Citrobacter youngae
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CD187_01020
Enzymes [BR:
cyo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CD187_01020
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
DUF7198
UL41A
Motif
Other DBs
NCBI-ProteinID:
AWV24916
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Position
202712..204718
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMAMVAAVVMVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSDT
ILKGDIPEAEAILKSIRPAGVVSRADVVLPNQFQALRMSFIPERPVPVTVTRLFELPVQI
SLPIYSLERSANPQPLAYLVLQADSYRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR
LIVHPLRKIARELNDIQQQDLIGYQLALPRLHQDDEIGMLVRSYNLNQQLIQRHSEEQSD
FAMRFPVSELPNKSFLMGLLEQVVTRQQTTALMIVTCETLRDTAGVLTETQREILLLTLV
EKLKSVLAPRMVLSQVSGYDFAIIAHGVKEPWHAITLGQQVLTIVNERLPIQGIQLRPTC
NIGVAMFYGDLTAEQLYRRALSAVLTSRHKGKNQIQFFDPLQMEEAQQRLTEENDILSAL
DNRQFALWMQPQVEMSSGKVLSAEALLRMQQPDGSWELPEGLIDRIESCGLMVTVGYWVL
EETCRQLSAWQERGLMLPLSVNLSALQLMHPSMVSDLLELLNRYRIKPGTLILEVTESRH
IDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDVLKIDKMFVDGVPED
CSMISAIIQLAHSLNLQMIAEGVETEAQREWLSQAGVEVAQGFLFARPVPANIFEERYLA
PESADYKS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgtcagtcgctcgttaacaattaagcagatggcaatggttgcggccgttgttatg
gtgttcgtttttattttttgcaccgttttgttgttccatctggtccagcaaaaccgctat
aacacggctacgcaactggaaagtatcgctcgctccgtccgtgagcctctgtcggacact
atcctgaaaggggatattcccgaagcggaagccattttaaaaagtattcggccagcgggc
gtggtaagtcgcgccgatgtggtgctgcccaatcagtttcaggcgttgcggatgagcttt
atccctgaacgccccgttcctgttacggtgactcgcctgtttgagcttccggtacaaatt
tcgctgccgatctattctcttgagcgttcagctaacccgcaaccgctggcgtatctggta
ctgcaggcggattcgtaccgcatgtacaaattcgtgatgagtacgctctcgacgttagtg
accatttacttacttttatcgttaatactgaccgtcgccatctcctggtgcattaaccgc
ttgattgtgcaccccttacgtaaaattgcccgtgagctgaacgacatccaacagcaggat
ctgattggttatcaactggcattgccgcgtctacatcaggatgatgagattggtatgctg
gtgcgtagctacaatcttaatcagcagttgattcagcgacatagcgaagagcaaagcgac
tttgcaatgcgtttcccggtttccgaactgcccaataagtcgtttttaatggggctgctg
gagcaggttgttacccgccagcagacgacggcgctgatgattgtcacctgcgaaacccta
cgtgacaccgcgggtgtgttaaccgaaactcagcgggaaatcctgctgcttacgctggtc
gaaaaactcaagtcggtattagcccccaggatggtgctttcccaggtgagtggctatgac
ttcgccatcatcgcccatggcgtaaaagaaccctggcacgctattactttaggtcagcaa
gtactcactatcgttaacgagcgattacctattcagggtattcaactgcgtcctacctgc
aacattggggtagcaatgttctatggtgatttgaccgcagaacagctttaccgccgcgct
ctctcggccgtattaacctcgcgccataagggtaaaaatcaaattcagttctttgatccg
ttacagatggaagaggcgcagcagcgtttgacggaagagaacgatattctcagcgcgctg
gataaccgtcagttcgcgctttggatgcagccgcaggtggaaatgtccagcggtaaggta
ttgagcgcagaagcattattgcggatgcagcagccggacggaagctgggagctgcccgaa
gggttaatcgacagaattgagtcctgtggtctgatggtgacggttggttactgggtgctg
gaagagacgtgtcgccagctgtcagcgtggcaggaacggggtctgatgctgccgctgtcg
gtgaatttgtccgcactacagctgatgcacccgagtatggtctcggacctgctggagttg
ttaaaccgctatcgcatcaagcctggtacgttgatcctggaagtgactgaaagccggcat
atcgatgatccccacgccgcggtggccattttgcgcccattgcgtaatgcgggagtacgt
atcgcactggatgactttggcatggggtatgcgggcctgcgacagctgcagcacatgaag
tcgctaccggtggatgtcctcaaaatcgataagatgtttgtcgacggagtacctgaggat
tgcagcatgatctccgccatcattcagttggcccacagccttaatttgcagatgatcgcc
gaaggtgtcgaaaccgaagcgcagcgtgaatggctatcacaagccggggtggaagtggca
caagggttcctgtttgcccgaccggttccggcaaatatcttcgaagaacgttatctggcg
ccggaaagcgctgattacaaaagttaa
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