Citrobacter youngae: CD187_02065
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Entry
CD187_02065 CDS
T05526
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cyo
Citrobacter youngae
Pathway
cyo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CD187_02065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyo03021
]
CD187_02065
03400 DNA repair and recombination proteins [BR:
cyo03400
]
CD187_02065
Enzymes [BR:
cyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CD187_02065
Transcription machinery [BR:
cyo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CD187_02065
DNA repair and recombination proteins [BR:
cyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CD187_02065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AWV25111
LinkDB
All DBs
Position
408678..409667
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDDVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactttgggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactacatgagtacagcaccaaagaaggcgttcaggaagatatcctggaa
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgacgttattctt
accttgaataaatctggcattggccctgtgactgcagccgacattacccatgatggtgat
gtcgaaatcgtcaagccacagcacgtgatctgccacctgaccgatgagaatgcatctatt
agcatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcttctacccgaattcat
tcggaggaagatgagcgcccaatcggccgtctgctggtcgacgcatgctacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggtacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccattctggctgaacaactggaagctttcgttgatttacgtgatgtacgtcagccg
gaagttaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaagcagaagctatccactatatcggtgat
ctggtacagcgtactgaggttgagcttcttaagacgcctaaccttggtaaaaaatctctt
accgagattaaagacgtgctggcttcccgtggactgtctctgggcatgcgcctggaaaac
tggccaccggcaagcatcgctgacgagtaa
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