Citrobacter youngae: CD187_04000
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Entry
CD187_04000 CDS
T05526
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
cyo
Citrobacter youngae
Pathway
cyo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CD187_04000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyo03400
]
CD187_04000
Enzymes [BR:
cyo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
CD187_04000
DNA repair and recombination proteins [BR:
cyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CD187_04000
Prokaryotic type
CD187_04000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
YqhI
DUF6308
Motif
Other DBs
NCBI-ProteinID:
AWV29121
LinkDB
All DBs
Position
complement(796246..797298)
Genome browser
AA seq
350 aa
AA seq
DB search
MQASQFSAQVLSWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFP
TVTDLAHAPLDEVLHLWTGLGYYARARNLHKAAQQVVTLHSGIFPQTFDEVAALPGVGRS
TAGAILSLSLGQHFPILDGNVKRVLARCYAVSGWPGKKEVEKKLWELSEQVTPAQGVERF
NQAMMDLGAMVCTRSKPKCSLCPLENGCVASANASWALYPGKKPKQTLPERTGYFLLMQH
DDEVLLSQRPPSGLWGGLYCFPQFDDEDGLRNWLAQRQINADNLTQLNAFRHTFSHFHLD
IVPMWLPVSSFTSCMDEGNALWYNLAQPPSVGLAAPVERLLQQLRAGTHV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgtctcaattttcggctcaggttttgagctggtacgacaaatacgggcggaaa
acgctgccctggcaaattgacaagacgccttacaaagtatggctctctgaggtaatgctg
caacaaactcaggttgcgaccgttatcccttattttgagcgctttatggcgcgcttccca
acggtaacggatttagcccatgcgccgctggatgaagttctgcatttgtggaccgggctg
ggttattacgcccgtgcgcgaaatctgcataaagccgcgcagcaggttgtgacgctgcat
agcggtatatttccgcaaacctttgatgaagtagccgccctacctggcgtcggacgttca
accgcaggcgcgatcctttctctctctctgggtcagcattttccgattctcgacggtaac
gtcaaacgcgtgctggctcgctgttatgctgtaagcggctggccgggtaaaaaagaggtc
gaaaagaagctgtgggagctgagcgagcaagttacgccggcccagggtgttgagcgtttt
aatcaggcgatgatggatttaggcgcgatggtctgtacgcgctcaaaacctaaatgttcc
ctgtgtccgttggaaaatggctgtgtggcgagcgccaatgcaagttgggcgctgtatccc
ggtaaaaagcccaaacagacgttaccggaacgaacgggctattttttactgatgcagcat
gatgacgaagtgctgctctcacagcgaccgcccagcggcttgtggggtggtttatactgt
tttccgcagtttgacgacgaagatggactgcgcaactggctggcgcaacgacaaattaac
gcagataatctgacccaacttaatgcgtttcgccatacctttagccatttccacttagat
attgtgcctatgtggcttcccgtgtcttcattcacctcatgcatggatgaaggcaacgcg
ctctggtataacttagcgcaaccgccgtcggtcggactggcggctcccgtggagcgtttg
ttacagcaattacgtgccggtacacacgtttaa
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