Citrobacter youngae: CD187_04745
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Entry
CD187_04745 CDS
T05526
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cyo
Citrobacter youngae
Pathway
cyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CD187_04745 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyo03400
]
CD187_04745 (recC)
Enzymes [BR:
cyo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CD187_04745 (recC)
DNA repair and recombination proteins [BR:
cyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CD187_04745 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AWV25581
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All DBs
Position
935052..938420
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AA seq
1122 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLAQKFSIAANI
DFPLPASFIWDMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDSDDFALLRHYLTDDTD
KRKLFQLSSRAADLFDQYLVYRPDWLTQWEAGRQVEGLGESQAWQAPLWKALVEYTAELG
QPRWHRANLYQRFIQTLENASECPQGLPSRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRYYWGDIKDPAWLAKLMARQRRHSFEERHLPLFRDNQKAEGLFNSDGEQDVGNPML
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHNIQSDILELESHAVAGVTLEEYSR
SDNKRRLELNDTSVTFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQSVFGSAPAERYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNIDEEGLRYLRLWVNESGIRWGIDDDNVRELELPPTGQHTWQFGLTRMLLGYAMESS
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNLWRRGLAQERPLEEWLPVCREMLNDFFI
PDADTEAAMTLIEQQWQAIITEGLGAEYGDAIPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELMDYIGQSHYLPGDESLTCDQSEARVKAHI
TRLHTRMPFDAQNYLPGEQQSYAREWLPAASLSGKAHTDFVQPLPFEMPETLTLETLQRF
WAHPVRAFFQMRLRVNFRSEESEIPDTEPFTLEGLTRYQLNQQLLNTLVEENDAERLFRR
FRAAGALPYGPFGEILWDTQRQEMQSLAERIIACRQPCQSMEIDLNCHGVQITGWLPQVQ
EDGLLRWRPSLISIVQGVQLWLEHLVYCASGGRGESRLFLRKDGEWRFPPLDAEQALLYL
SQLIEGYREGMSSPLLVLPESGGAWIKTCYDAANDAMLDDDATLQKARSKFLQAYEGNMM
VRGEGDDIWYQRLWRQLDADTQEAIVLQSQRYLLPIFRFNQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaaccgtctggatgtgctggaagcgttaatggaatttatc
gttgagcgcgagcggctggacgacccctttgagcctgaaatgatcctggttcaaagtacc
ggtatggctcagtggctacaaatgactcttgcacagaagtttagtattgccgccaatatc
gattttccgctgcccgcgagttttatctgggatatgtttgtgcgcgtgctgccggatatc
ccgaaagagagtgcgttcagcaaacagagcatgagctggaagttgatgacgctgttgcca
caattgctggatagcgatgacttcgcattgctacgccactatctgacggacgacactgat
aaacgtaagctttttcagctttcctcgcgcgcggctgaccttttcgatcagtatttagtc
taccgccctgactggttgacccagtgggaagcggggcgacaggttgagggacttggcgag
tctcaggcctggcaggcaccgttgtggaaagcgctggtggaatacaccgcggaattgggc
caaccgcgctggcatcgtgccaatttataccaacgatttattcagacgttagaaaacgcg
tccgagtgcccacagggactgccttctcgggtctttatttgcggtatttcggcgctgccg
ccggtttatttgcaggcattgcaggcgctgggtaagcacattgatattcatctgctgttt
accaacccttgtcgctactactggggggatattaaagatccggcctggctggcgaagctg
atggcacgtcagcgtcggcacagctttgaagaacggcatctgccgctgtttcgtgataat
cagaaagccgaaggattatttaacagcgatggcgaacaggatgtgggcaacccgatgctg
gcctcgtggggcaagctggggcgtgattacatttatttgctttcggagctggaaaatagt
caggaactggatgcgtttgtcgatattacgcctgacaaccttttgcataatattcaatca
gatattctggaacttgaaagtcatgccgtggcgggcgttacgctggaagaatattcccgt
agcgacaataaacgacggcttgagctgaacgacaccagcgtgacttttcatgtctgccat
agcccacagcgcgaggtggaaattcttcatgaccggctgttggccatgctggaagcggac
ccaacgctgacaccgcgcgatattatcgtgatggtggcggacatcgacagctacagccca
ttcattcagtcggtctttggtagcgcgccagccgagcgttacttaccttatgcgatatct
gaccgtcgggcacgccagtctcatcccgtcttacaggcctttatcagcctgctgtcgctg
ccggatagccgttttgtctcagaggatgtcctggcgttactggatgttcccgtgctggcg
gcgcgtttcaacattgatgaagaagggttgcgctatcttcgtttatgggtcaatgaatcc
gggattcgttggggaattgacgacgataacgtgcgtgaactggaacttccacctacaggt
cagcatacctggcaatttggtttaacgcgtatgctgctcggctacgcgatggaaagctcg
cagggcgagtggcaatcggtattgccttacgatgagtccagcggcctgattgccgagctg
gtagggcatctggcctcgttgctgatgcagcttaatctctggcgtagagggttagcgcag
gaacgaccgctggaagagtggctacccgtttgtcgggaaatgcttaatgatttcttcata
ccggacgcggacaccgaagctgcaatgacgctgattgaacagcagtggcaggccattatt
accgaaggtttaggggccgagtacggcgatgctataccgctctctctgttgcgtgatgag
ctagcccagcgccttgaccaggaacgcatcagccagcgcttcctggcggggcccgttaac
atttgtacgctgatgccgatgcgctccattccgttcaaagtggtgtgcctgctgggtatg
aacgatggggtttatccgcgtcagcttgcgccgctgggctttgatttaatgagccaaaaa
ccgatgcggggcgatcgcagtcgtcgagatgatgaccgctatctgttcctcgaagcatta
atttcggcacagcagacgctctacatcagctacattggccgctctattcaggataacagc
gagcgcttcccgtcggtgctggttcaagaactgatggactacattggacaaagccattat
ctgccgggcgatgaatcgttgacctgcgatcaaagcgaggcaagggtaaaagcgcatata
acccgtttgcatacccgtatgccctttgatgcacaaaactatttgccgggcgaacagcaa
agctatgcccgggaatggctgcctgcagcgagtctgtcaggaaaagcgcacacggatttt
gtgcagcctctgccctttgaaatgccagaaacgctaacgctggaaacgctgcagcgattt
tgggcacatccggtacgcgcctttttccagatgcgtttaagggtcaacttccgctctgaa
gagagtgagatcccggatacggaacctttcactcttgaagggttaacccgctaccagctt
aatcagcaattgcttaatacgctggttgaagagaacgatgctgaacgactgttccgccgt
tttcgtgcggcgggcgcgctaccctatgggccgtttggcgaaattctgtgggatacgcag
cgtcaggaaatgcagtcgctggctgaacgcattatcgcctgtcgtcagccctgtcagagc
atggaaatcgatcttaactgtcacggcgtgcaaatcaccggttggctgccgcaggtgcaa
gaggacggtttgttgcgctggcgcccatctttgataagcattgtgcagggtgtgcaactt
tggctggaacatcttgtctattgtgccagtggcggtaggggagagagccgattgttcctg
cgtaaagacggagaatggcgttttccgccgctggatgcagaacaggcgttgctgtacctg
tcgcaactcattgaagggtatcgggaaggcatgtcgtcaccgttgctggtattgcccgaa
agcggcggtgcatggataaaaacctgttatgacgccgcaaatgatgccatgttagatgac
gatgcaacgttgcaaaaagcgcgcagtaagtttctgcaagcctatgaaggcaacatgatg
gtacgtggcgaaggtgatgatatctggtatcagcgtctttggcgtcaactggatgctgat
acgcaggaggctattgttttacagtctcagcgctacctgttaccgatttttcgctttaat
cagtcatga
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