Citrobacter youngae: CD187_04760
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Entry
CD187_04760 CDS
T05526
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cyo
Citrobacter youngae
Pathway
cyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CD187_04760 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyo03400
]
CD187_04760 (recD)
Enzymes [BR:
cyo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CD187_04760 (recD)
DNA repair and recombination proteins [BR:
cyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CD187_04760 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Helicase_RecD
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
nSTAND3
MukB
AAA_28
AAA_16
Herpes_Helicase
FtsK_SpoIIIE
DUF6079
UvrD_C
CbiA
DO-GTPase1
T2SSE
DEAD
Motif
Other DBs
NCBI-ProteinID:
AWV25584
LinkDB
All DBs
Position
945023..946852
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AA seq
609 aa
AA seq
DB search
MTIQKRFLEAVEQKQLRPLDAQFALAVAGSDNPAVALAAALLSREAGEGHVCLPLSRLSL
SEDAHPLLSAWLAETGEPKDWAECLLASSAVSRGEQPTPLVLYGDRLYLNRMWHNERTVA
RFFSEVNHAIEVDEQRLTHTLEALFPPSEGVNWQKVAAAVALTRRISVISGGPGTGKTTT
VARLLAALIQMADGERCRIRLAAPTGKAAARLTASLGAALRELPLTDEQKKRIPDDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPPHGRVIFLGDRDQ
LASVEAGAVLGDICAFVGDGFTPERARQLSRLTGSAIPAGSGIQAAALRDSLCLLQKSYR
FGSDSGIGQLAAAINRGDKTAIKTVFQQGFSDIEKRTLHSSEDYAAMLDEALSGYGHYLD
LLHGGAEPGAVIQAFNEYQLLCALREGPFGVSGLNERIEQVMAQKRKIHRSTHSRWYEGR
PVMIARNDSSLGLFNGDIGIALDRGQGLRVWFALPDGSIKSVQPSRLPEHETTWAMTVHK
SQGSEFDHAALILPSQHSPVITRELVYTAVTRARRRLSLYADERILSRAIATRTERRSGL
SALFNDGMM
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacaatccagaaacgatttctggaggctgttgagcaaaaacagctccggcctctggat
gctcagttcgcgctggcggttgccggaagtgataacccagccgttgcgctggctgcggcg
ttgctcagccgtgaagcgggagaagggcacgtctgcttaccgctttcacggttatctctg
agcgaggacgcgcatcctctgttaagcgcctggctcgctgaaacgggcgagccaaaagac
tgggcggaatgtctgctggcttccagtgcggtaagccgtggcgagcaacccacgccgctg
gtgctgtacggcgatcgcctgtatctgaaccggatgtggcacaacgaacgtacggtagct
cgctttttcagtgaagtgaaccacgccattgaagtggatgaacaacggctgacccacacg
ctggaggcgctgtttccgccatcggagggggttaactggcaaaaagtagccgctgctgtt
gcgctcacccgccggatatcggtgatctccggcggaccggggacgggaaaaacgacaacg
gtcgcaaggctgctggcggcgttgattcaaatggccgacggtgagcgctgtcgtattcga
ctggcggcgccaacgggaaaagcggctgcgcgcctgaccgcctcactaggcgcggcgcta
cgagaactaccgctaaccgatgagcaaaagaaacgcatccccgatgacgccagtacgctg
catcgattattaggcgctcagcctggcagtcagcgcctgcgtcatcatgcgggaaacccg
ctgcatttggatgtgctggtggtggatgaagcctcgatgattgatttaccgatgatgtcg
cgccttatcgatgcgctgccgccgcacggacgggtgatttttctgggcgatcgcgaccag
ctcgcttccgtcgaagcgggggccgtgctgggggatatctgtgctttcgtcggtgacggg
tttaccccggaacgcgcccgccagctcagtcgcctgaccgggagcgctattcctgccggt
tcgggaattcaggcagcagcgttgcgcgacagtctgtgcctgctgcaaaagagctaccgt
ttcggcagcgattccggaatcggtcagttggccgcggcgattaatcgcggcgacaaaact
gcgataaaaacggtgttccagcagggatttagcgacatcgaaaaacgcacgctacacagc
agcgaggattatgccgcgatgctggatgaggcgctgtcgggatatgggcactacctggat
ttgctgcacgggggtgccgaaccgggggctgtcattcaggccttcaatgagtatcagctg
ctatgcgccctgcgggaaggtccgtttggcgttagtggtttgaatgaacgcattgagcag
gtgatggcgcaaaaacgtaaaattcatcgttcgacccatagccgctggtatgagggaagg
ccggtgatgatcgcgcgcaatgacagttcgctgggattatttaacggtgatatcggcatt
gccctcgaccgtggacagggcctgagggtgtggtttgcgctgccggatggttctatcaaa
tcagtgcagcccagccgcttgcctgaacatgaaaccacctgggcgatgacggtgcacaaa
tcgcagggatctgagtttgaccacgcggcgttgattttacccagccagcattcacccgtg
attacccgcgagctggtctatacggccgttacccgcgcgcgtcgtcgtctgtcgctgtac
gccgatgagcggatattaagccgcgccattgccacccgcaccgaacgtcgcagcgggctg
tcagcattatttaatgacggcatgatgtag
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