Citrobacter youngae: CD187_08130
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Entry
CD187_08130 CDS
T05526
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
cyo
Citrobacter youngae
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyo03400
]
CD187_08130
DNA repair and recombination proteins [BR:
cyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
CD187_08130
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
AAA_16
zf-tcix
SLFN-g3_helicase
AAA_22
DUF7577
Zn_ribbon_3
UPF0547
TerL_ATPase
Motif
Other DBs
NCBI-ProteinID:
AWV29158
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Position
complement(1677722..1679482)
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AA seq
586 aa
AA seq
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MIFTLRPYQKEAVDATLNHFRHHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVAQNHAKYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECH
RIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYHFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNQELKKQQRITPH
IISQIVEFAQTRKGVMIFAATVEHAKEILGLLPADDAALITGDTPGAERDVLIEEFKAQR
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGAPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMV
LQNGQDDKGEWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGIPLRWITS
ADILNQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatttttactcttcgcccgtaccaaaaagaagccgtggacgccacgctcaaccatttt
cgccaccaccgcaccccggcggttatcgtcctgccaaccggcgcgggcaaaagtctggtg
attgctgaactggcccgcgtggcacgtggtcgcgtactggtactggcgcacgtcaaagaa
ctggtcgcacaaaaccatgccaaatattgtgcgctggggctggaagccgatatttttgcc
gcaggcctgaagcgtaaagagagccacgggaaagtggtctttggcagcgtacagtcggta
gcgcgtaatctggacgcctttcagggagaattctcactgctgatcgtcgatgaatgccat
cgtattggcgatgatgaagagagtcagtatcagcaaatcctcactcacctgactaaagta
aatccccacttacgtctgctcgggcttactgccacgccttttcgtttgggcaagggctgg
atttatcattttcattatcatggtatggtgcgcggcgatgaaaaagcgctgtttcgcgac
tgcatttatgaattaccgctgcgctacatgattaaacacggctacctgacgccgccagaa
cgcctcgacatgccggtcgtgcagtatgactttagccgcctgcaggcgcagagtaacggc
ctgtttagcgaagcggatctgaatcaggagctgaaaaagcagcaacgaataacgccgcat
atcatcagccagattgtcgagtttgcccaaacccgcaaaggggtgatgattttcgccgcc
accgttgagcacgccaaagaaattctgggcctgctgcccgctgacgacgccgcgctaatc
actggggatacgccaggcgctgagcgcgacgtgctgattgaagagttcaaagcccagcgc
tttcgctatctggtgaatgtgtcggtcctgaccaccggctttgatgccccgcacgttgac
cttatcgccattctgcgcccgacggaatcagttagcctttaccaacaaattgtcggtcgt
gggttgcgccttgcaccgggtaaaaccgactgtctgatcctcgattatgccggcaacccg
cacgatctgtacgcaccggaagtgggtgcaccgaaagggaaaagcgacaacgttccggta
caggtgttctgtcctgcctgcggatttgcaaacaccttctggggcaaaaccacggcagac
ggcacgctgattgaacattttggccgccgctgccagggatggtttgaagatgatgacggc
catcgcgaacagtgcgattttcgtttccgttttaaaaactgtccacagtgcaacgcggaa
aatgacattgctgcccgccgttgtcgcgagtgcgacacggtgctggttgacccggatgac
atgctgaaagccgcgctcaggctcaaagatgcgctggtcctgcgctgtagtggtatggtg
ttacaaaacgggcaggatgataaaggcgaatggctgaaaatcacctattacgatgaagat
ggcgctgacgtcagcgaacgctttcgcctgcacactcccgcgcagcgtacggccttcgaa
caactgtttattcgcccgcacacccgaacccccggtatacccttacgctggataacctcc
gccgatatcctcaatcagcaggcgttgttacggcatcctgatttcgtggtggcgcgtatg
aaaggtcagtactggcaggtccgtgaaaaggtcttcgattatgaaggtcgctttcgtcgg
gcacatgaattacgcggttaa
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