KEGG   Citrobacter youngae: CD187_08130
Entry
CD187_08130       CDS       T05526                                 
Name
(GenBank) ATP-dependent helicase
  KO
K19789  DNA repair protein RadD
Organism
cyo  Citrobacter youngae
Brite
KEGG Orthology (KO) [BR:cyo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cyo03400]
    CD187_08130
DNA repair and recombination proteins [BR:cyo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     CD187_08130
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 AAA_30 AAA_16 zf-tcix SLFN-g3_helicase AAA_22 DUF7577 Zn_ribbon_3 UPF0547 TerL_ATPase
Other DBs
NCBI-ProteinID: AWV29158
LinkDB
Position
complement(1677722..1679482)
AA seq 586 aa
MIFTLRPYQKEAVDATLNHFRHHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVAQNHAKYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECH
RIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYHFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNQELKKQQRITPH
IISQIVEFAQTRKGVMIFAATVEHAKEILGLLPADDAALITGDTPGAERDVLIEEFKAQR
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGAPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMV
LQNGQDDKGEWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGIPLRWITS
ADILNQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgatttttactcttcgcccgtaccaaaaagaagccgtggacgccacgctcaaccatttt
cgccaccaccgcaccccggcggttatcgtcctgccaaccggcgcgggcaaaagtctggtg
attgctgaactggcccgcgtggcacgtggtcgcgtactggtactggcgcacgtcaaagaa
ctggtcgcacaaaaccatgccaaatattgtgcgctggggctggaagccgatatttttgcc
gcaggcctgaagcgtaaagagagccacgggaaagtggtctttggcagcgtacagtcggta
gcgcgtaatctggacgcctttcagggagaattctcactgctgatcgtcgatgaatgccat
cgtattggcgatgatgaagagagtcagtatcagcaaatcctcactcacctgactaaagta
aatccccacttacgtctgctcgggcttactgccacgccttttcgtttgggcaagggctgg
atttatcattttcattatcatggtatggtgcgcggcgatgaaaaagcgctgtttcgcgac
tgcatttatgaattaccgctgcgctacatgattaaacacggctacctgacgccgccagaa
cgcctcgacatgccggtcgtgcagtatgactttagccgcctgcaggcgcagagtaacggc
ctgtttagcgaagcggatctgaatcaggagctgaaaaagcagcaacgaataacgccgcat
atcatcagccagattgtcgagtttgcccaaacccgcaaaggggtgatgattttcgccgcc
accgttgagcacgccaaagaaattctgggcctgctgcccgctgacgacgccgcgctaatc
actggggatacgccaggcgctgagcgcgacgtgctgattgaagagttcaaagcccagcgc
tttcgctatctggtgaatgtgtcggtcctgaccaccggctttgatgccccgcacgttgac
cttatcgccattctgcgcccgacggaatcagttagcctttaccaacaaattgtcggtcgt
gggttgcgccttgcaccgggtaaaaccgactgtctgatcctcgattatgccggcaacccg
cacgatctgtacgcaccggaagtgggtgcaccgaaagggaaaagcgacaacgttccggta
caggtgttctgtcctgcctgcggatttgcaaacaccttctggggcaaaaccacggcagac
ggcacgctgattgaacattttggccgccgctgccagggatggtttgaagatgatgacggc
catcgcgaacagtgcgattttcgtttccgttttaaaaactgtccacagtgcaacgcggaa
aatgacattgctgcccgccgttgtcgcgagtgcgacacggtgctggttgacccggatgac
atgctgaaagccgcgctcaggctcaaagatgcgctggtcctgcgctgtagtggtatggtg
ttacaaaacgggcaggatgataaaggcgaatggctgaaaatcacctattacgatgaagat
ggcgctgacgtcagcgaacgctttcgcctgcacactcccgcgcagcgtacggccttcgaa
caactgtttattcgcccgcacacccgaacccccggtatacccttacgctggataacctcc
gccgatatcctcaatcagcaggcgttgttacggcatcctgatttcgtggtggcgcgtatg
aaaggtcagtactggcaggtccgtgaaaaggtcttcgattatgaaggtcgctttcgtcgg
gcacatgaattacgcggttaa

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