Citrobacter youngae: CD187_09390
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Entry
CD187_09390 CDS
T05526
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
cyo
Citrobacter youngae
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyo03400
]
CD187_09390
DNA repair and recombination proteins [BR:
cyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CD187_09390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AWV26429
LinkDB
All DBs
Position
1937307..1937774
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AA seq
155 aa
AA seq
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MADVHDKATRSKNMRAIATRDTAIEKRLASVLTEQGVTFRVQDATLPGRPDFVVDDYHCV
IFTHGCFWHHHDCYLFKVPATRTEFWLEKIGKNVQRDARDCEKLQALGWRVLIVWECALR
GREKLDDEALSERVIEWICGGGDTAQIDTLGIHLL
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgttcacgataaagcaacacgcagtaaaaatatgcgggcgatagctacccgc
gataccgcaattgaaaaacgccttgccagcgtgctgacagagcagggggtaacgtttcgc
gtgcaggatgcgacgttacccggtcgccctgattttgtggtggatgattatcattgtgtg
atttttactcatggctgtttctggcaccaccacgattgctatttgtttaaagtccccgcg
acacgaacggaattctggctggaaaaaataggcaaaaatgtccagcgcgatgcgcgggat
tgtgaaaagttgcaggctctgggctggcgcgtactgattgtctgggagtgcgccctgcgt
ggtcgcgaaaagctggacgatgaagcgttatctgaacgtgtcatcgagtggatctgcggc
ggtggcgacaccgcgcagatcgacacactcggtattcatttactgtaa
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