Citrobacter youngae: CD187_10990
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Entry
CD187_10990 CDS
T05526
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
cyo
Citrobacter youngae
Pathway
cyo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CD187_10990
Enzymes [BR:
cyo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CD187_10990
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AWV26720
LinkDB
All DBs
Position
complement(2247021..2249012)
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AA seq
663 aa
AA seq
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MKDVRELVTLYSYVGTHNPYWRLSEDCNILHFSIDETADAEQTIELSPEQADRIREMTVI
TSSLLMTLPIEDDDIPVHLVGRKINKREWAGSASAWDDTPSVARDLAQGLSFAEQVVSEA
NSVIVILDRMGNIQRFNRLCEEYTGLREREVIGQSVFTLFMSRREAAASRRNIEVFFREG
NSYEVERWVKTCKGQRLFLFRNKFVHNGSGKNEIFLICSGTDITEERRAQERLRMLANTD
SITGLPNRNAIHELISDAIENAGDTQVGIVYLDLDNFKKVNDAYGHMFGDQLLQSVSLAI
LSCLDDNQLLARFGGDEFIVLATETSQSTLEATASRILTRLRQPFRIGLIEVYTGCSIGI
SLAPQHGQDCESVIRNADTAMYTAKEGGRGQFCVFSPEMNQRVFEYLWLDTNLRKALEND
QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVV
RQVAKWRAKGINLRVAVNVSARQLADQTLFTDLKQVLHELDFEYCPIDVELTESSLIENE
QLALSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPLDAIKLDQTFVRDVHKQPISQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPAAAFERWYRRHLNK
KTR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtccgggagctggttacgttgtatagctatgtgggcactcataacccctac
tggcgtttgtcagaggattgcaacatcctgcatttctctattgacgaaacagcagacgct
gagcagaccatcgaattatcacccgagcaggccgaccgcattcgcgagatgacggtaatt
acgtcaagcctgttgatgacattacctattgaagatgacgatattccggtacatttggtc
gggcggaaaatcaataagcgcgaatgggccggcagcgcatcagcctgggatgacacccct
tccgtcgcacgcgatctggctcaaggtctctcttttgccgagcaggtggtttcagaagcc
aactccgttattgtcattcttgaccgcatgggcaacattcagcgttttaaccgtctgtgc
gaagagtacaccggactcagagaacgtgaagtcattggccaaagcgtattcacactgttt
atgagtcgacgtgaagcagcagcctccagacgcaacatcgaggtcttttttcgcgaaggc
aactcatatgaagtcgaacgttgggtgaagacctgcaaaggtcagcgcctgtttcttttt
cgcaataagtttgtacataacggtagcggcaagaacgaaatatttctgatctgttccggc
actgatatcactgaagaacgccgcgcgcaggaacgcctgcgtatgttggctaataccgac
tccatcaccggattaccgaaccgtaacgccattcatgagctgataagcgacgcgattgag
aacgcaggtgatactcaggttgggattgtatatctcgatctggataacttcaaaaaggtg
aacgatgcctacgggcatatgtttggcgatcagctattacagagtgtgtcgctggcaatc
ctcagttgtcttgacgacaaccagctattggctcggtttggcggtgatgaatttatcgtc
cttgccaccgaaacgtcccagagcactctggaagctaccgcatcgcgcattctgacacgc
ctgcgtcagccctttcgcattggcctgattgaagtctatacaggctgctctattggtatt
tcccttgctccacagcatggtcaggactgcgagagcgtcattcgtaacgccgatacggcc
atgtacaccgcgaaagaaggcggccgcggacagttttgtgttttctctccggaaatgaat
cagcgggtatttgaatacctgtggctggatactaacctgcgcaaggcgctggaaaacgat
caactggttatccattatcagccaaagataacctggcgaggcgaagtgcgcagcctggag
gcgctggtacgctggcagtctccggaacgcggcctcattccaccactggaatttatctcc
tacgccgaagaatcagggcttatcgttccgctgggtcgctgggttattctggacgttgtg
cgtcaggtcgcaaaatggcgcgccaagggaatcaatctgcgcgtggcggtaaacgtttct
gcccgccagctcgccgatcagacgctatttaccgatctcaaacaggtgcttcatgaactc
gactttgaatattgccccatcgatgtcgagttaacggaaagcagtttgattgaaaatgag
cagttggcactgtccgtcattcagcagtttagccagttgggggcgcaaatccatttggat
gattttggtactggatattcgtcactgtctcaactggcccgcttcccgcttgatgcaatt
aaactggatcagacctttgtcagggatgtacacaaacaacctatttcgcagtcgctggta
cgtgccattgttgcggtcgcacaggcactcaatctgcaggtcatcgccgaaggtgttgaa
agcgcgaaagaggatgcgtttttaaccaaaaatggtgtcaacgagcgtcagggttttttg
tttgccaaaccaatgccagcggctgcatttgaacgttggtatcgacgacatctgaataaa
aaaacgcgctaa
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