Citrobacter youngae: CD187_10995
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Entry
CD187_10995 CDS
T05526
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cyo
Citrobacter youngae
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyo03016
]
CD187_10995
Enzymes [BR:
cyo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CD187_10995
Transfer RNA biogenesis [BR:
cyo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CD187_10995
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
OSR1_C
PilZ
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
AWV26721
LinkDB
All DBs
Position
complement(2249278..2251212)
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTEKDRESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVEH
EFKEGDWAVAEMRRHPLKGDRTFYAELTQFITFADDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLVREDLTALNFVTIDSASTEDMDDALYAEEQADGTLQLTVAIADPTAWIAEGSK
LDKTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMSITADGTIEDNITF
FAATIESKAKLAYDNVSDWLEGTGEWQPENDAIAEQIRLLHRICLSRGEWRHNHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHMGFD
PTNADALAALLKTHGMHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSYAEISIE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETVARPQDDTTAQMAERRRLNRM
AERDVGDWLYARFMSDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQESGTVQIKGEVVYKVTDVIDVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggacaacccgctgctagcgcagcttaaacagcaactacattcccagacgcca
cgtgctgaaggggtggtaaaagccacggaaaaaggctttggcttcctggaagtcgatgca
caaaaaagctatttcattccaccgccgcagatgaaaaaagtgatgcatggcgaccgtatt
gttgcggttatccatacagaaaaagatcgtgagtctgctgagccggaagaactgatcgaa
cccttcctgacgcgcttcgtgggtaaagttcagggcaaaaatgaccgtctgtccattgtg
ccggatcatccgttactgaaagatgctattccttgtcgtgcagcccgcggcgttgaacat
gaatttaaagaaggcgactgggctgttgcagaaatgcgccgccatccgctgaaaggcgat
cgcaccttctacgccgagttaacccaatttatcacttttgctgatgaccactttgtcccg
tggtgggtcacactggcacgccataatctggaaaaagaagcaccagacggtgtagcaacc
gaaatgctggacgaaggcctggttcgtgaagatttaaccgccctcaatttcgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgctgaagaacaagctgacggc
acgctacaattaaccgtcgccattgccgacccaacagcctggattgcagaaggcagcaag
ctggataaaacggctaaaattcgcgcgttcaccaattatttaccggggttcaatatcccg
atgttaccacgtgaattgtctgacgatctctgctctctgcgcgcgaacgaagtgcgcccg
gttttagcttgtcgtatgagcattaccgccgatggcacgattgaagacaacatcaccttc
ttcgccgcaaccatcgagtctaaagcgaagctggcctatgacaatgtttccgactggctg
gaaggtactggcgagtggcaaccagaaaacgacgcgattgcggaacaaatccgtctgctg
catcgtatttgcctgagccgaggagagtggcgtcataaccacgcgctggtctttaaagat
cgcccggattaccgtttcgttctcggtgaaaaaggtgaagtactggacatcgtcgctgag
ccacgccgcatcgcaaaccgtatcgtggaagaatccatgattgcggcaaatatttgcgcc
gcccgtgtgcttcgcgacaagctgggcttcggtatttacaacgtccatatgggattcgac
ccgaccaacgccgacgctctggccgcgctgctgaaaacccacggtatgcacgtcgatgcc
gaagaagtactgacactggaaggtttttgcaaactgcgccgcgaactggatgcacagcca
tccggcttcctcgacagccgaattcgccgcttccagtcttacgctgaaattagtattgag
ccaggtccacactttgggttgggtctggaggcatatgccacctggacttccccaatccgt
aagtacggcgatatgatcaaccaccgtctgcttaaggccgtcatcaaaggcgaaaccgtc
gcccgacctcaggatgataccaccgcgcagatggcagaacgtcgtcgcctgaaccggatg
gctgagcgtgatgtgggtgactggctatacgcccgtttcatgagtgataaagccggaact
gacacccgctttgcggccgagatcatcgacgtcagccgcggtggcatgcgcgtacgtttg
gttgataatggcgctgttgcctttattcctgcacccttcctgcacgccgtgcgtgatgaa
ctggtctgcagccaggaaagtggtaccgtacaaatcaaaggtgaagtggtttacaaagtc
actgatgtgattgacgtaactatcgccgaagttcgcatggaaacccgtagcgttatcgcg
cgtccagcagcgtaa
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