Citrobacter youngae: CD187_16760
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Entry
CD187_16760 CDS
T05526
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cyo
Citrobacter youngae
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyo03400
]
CD187_16760
Enzymes [BR:
cyo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CD187_16760
DNA repair and recombination proteins [BR:
cyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CD187_16760
Prokaryotic type
CD187_16760
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AWV27768
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All DBs
Position
complement(3382491..3383909)
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AA seq
472 aa
AA seq
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MTTHLVWFRRDLRLHDNLALAAACRDRSAHVLALYISTPEQWKAHDMAPRQAALVNVQLN
ALQTALAEKGIPLLFHEVGDFATSVETVKNVCVQHGVSRIFYNYQYEINERQRDAAVEKS
IPQVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRIKDGIPECVSAPKVRESGA
LDSPLTSITLSYPQQDFDSQQFPAEEKLAIAQLRHFCQQAAGEYEQLRDFPAIDGTSRLS
ASLATGGLSPRQCLNRLLVEQPQALEDGAGSVWLNELIWREFYRHLMTYHPALCRYQPFI
RWTDRVQWQNNPTHLQAWKTGNTGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRKGEQYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDRDGEFIRQW
VPELRDVPGKAIHEPWSWAEKAQVTLSYPRPIVDHQQARLATLAAYEAARKG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatctggtctggtttcggcgtgatttacgtctgcatgacaatctcgcgctg
gcggcggcttgtcgggatcgttctgcacatgtactcgcgctctatatctccacgcctgaa
cagtggaaggcgcatgatatggccccacgtcaggcggcattggttaacgtgcagttgaac
gcgttgcaaacggcgctggcagaaaagggcatcccgcttctgtttcatgaagtcggtgat
tttgcgaccagtgtggaaaccgtcaaaaacgtctgcgtacagcatggcgtcagtcgaata
ttttataactatcaatatgaaataaacgaacgccagcgtgatgctgccgttgaaaagtca
atacctcaggtggtgtgcgaagggtttgacgacagcgtgatcctgcctccgggggcggtc
atgaccggtaatcacgagatgtataaagtctttacgccgtttaaaaatgcctggctgaag
cggataaaagacgggatcccagaatgtgtcagtgcgccgaaggtgagagaaagcggtgct
cttgactctccattaacatccatcacgctgagctacccgcagcaggattttgattcgcag
caatttccggcagaagaaaaattggccatcgcgcagttacgccatttttgccagcaggcc
gccggagaatatgaacaactgcgtgactttccggcgattgatggaaccagtcgattatcc
gcgagcctggcgacaggtggactatcaccgcgccagtgcctgaatcgactgctcgtggag
cagccgcaggcgcttgaggatggggcaggcagcgtttggttgaatgagcttatctggcgc
gaattttatcgtcatctgatgacttaccatccggcgctgtgtcggtatcaaccttttatt
cgctggaccgatcgcgtgcaatggcagaataatccgacgcatttgcaggcctggaaaaca
gggaatacgggctaccccattgtggatgcggccatgcgtcagctcaacgccacgggctgg
atgcataatcgtttacgaatgattaccgccagttttttagtgaaagacctgctgatcgac
tggcgtaaaggcgaacaatatttcatgtcgcaactgatcgatggcgacctggcggccaat
aacggcggctggcagtgggcagcctcaaccggaaccgacgccgcaccgtatttccgtatc
tttaaccccacgacgcagggcgaaaaatttgatcgtgacggtgagtttatccgccagtgg
gtgccggaactgcgcgacgtgccgggtaaagccattcatgaaccgtggtcgtgggctgaa
aaagcgcaggtaacactgagttatcctcgcccgattgtggatcatcaacaggcgaggctg
gcgacgctggcggcatatgaggcggcgcgtaagggataa
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